RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA940501" and tax_phylum = "Preplasmiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA940501 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2534240 2534240 PRJNA940501_S_NODE_80802_length_252_cov_1.679426_g79984_i0 PRJNA940501 80802 252 1.679426 4.23215352 Alphatectivirus 2169669 Viruses Viruses 424 4.2e-114   NTclustered gi|2693686684|gb|PP412828.1| 3127592 g79984 i0 100 54.8849206349206 229 0 91 0 1 229 1612 1840 Enterobacteria phage PRDcobalt, complete genome blastn 13831 424 1 Viruses   Bamfordvirae Preplasmiviricota Tectiliviricetes Kalamavirales Tectiviridae   Enterobacteria phage PRDcobalt
17835477 17835477 PRJNA940501_S_NODE_314614_length_164_cov_1.752066_g313796_i0 PRJNA940501 314614 164 1.752066 2.87338824 Alphatectivirus 2169669 Viruses Viruses 298 1.59e-76   NTclustered gi|2693687230|gb|PP412836.1| 3127600 g313796 i0 99.39 65.0975609756098 164 1 100 0 1 164 1173 1336 Enterobacteria phage PRDhazel, complete genome blastn 10676 298 1 Viruses   Bamfordvirae Preplasmiviricota Tectiliviricetes Kalamavirales Tectiviridae   Enterobacteria phage PRDhazel
24209076 24209076 PRJNA940501_S_NODE_178839_length_200_cov_1.496815_g178021_i0 PRJNA940501 178839 200 1.496815 2.99363 Alphatectivirus 2169669 Viruses Viruses 370 4.22e-98   NTclustered gi|2127008276|gb|OK041468.1| 2884452 g178021 i0 100 73 200 0 100 0 1 200 1468 1667 Burkholderia phage BCE1, complete genome blastn 14600 370 1 Viruses   Bamfordvirae Preplasmiviricota Tectiliviricetes Kalamavirales Tectiviridae Alphatectivirus Alphatectivirus PRD1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;