RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA940501" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA940501 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9848581 9848581 PRJNA940501_S_NODE_317788_length_163_cov_45.175000_g316970_i0 PRJNA940501 317788 163 45.175 73.63525 Vairimorpha necatrix 6039 Fungi Fungi 58.4 2.92e-4   NTclustered gi|2735582564|ref|XM_065472493.1| 6039 g316970 i0 94.737 0.233128834355828 38 0 22 2 99 134 128 91 Vairimorpha necatrix uncharacterized protein (VNE69_01357), partial mRNA blastn 38 58.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
20045553 20045553 PRJNA940501_S_NODE_193356_length_195_cov_1.546053_g192538_i0 PRJNA940501 193356 195 1.546053 3.01480335 Nematocida parisii 586133 Fungi Fungi 54.7 0.005   NTclustered gi|906374713|ref|XM_013204459.1| 881290 g192538 i0 100 0.292307692307692 29 0 15 0 63 91 993 1021 Nematocida parisii ERTm1 uncharacterized protein (NEPG_02086), partial mRNA blastn 57 54.7 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida parisii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;