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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA940501" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA940501 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3470533 3470533 PRJNA940501_S_NODE_24643_length_342_cov_2.869565_g23825_i0 PRJNA940501 24643 342 2.869565 9.8139123 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 54.7 0.009   NTclustered gi|2037949781|ref|XM_041619873.1| 7654 g23825 i0 96.97 0.385964912280702 33 0 9 1 100 131 5147 5115 PREDICTED: Lytechinus variegatus rho GTPase-activating protein 29-like (LOC121424255), transcript variant X2, mRNA blastn 132 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
7299685 7299685 PRJNA940501_S_NODE_54606_length_279_cov_0.995763_g53788_i0 PRJNA940501 54606 279 0.995763 2.77817877 Anneissia japonica 1529436 Echinodermata other_Eukaryota 217 8.61e-52   NTclustered gi|1826615520|ref|XM_033240640.1| 1529436 g53788 i0 83.55 123.996415770609 231 38 83 0 36 266 70 300 PREDICTED: Anneissia japonica ubiquitin-40S ribosomal protein S27a (LOC117100817), transcript variant X2, mRNA blastn 34595 217 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
8574005 8574005 PRJNA940501_S_NODE_374027_length_153_cov_1.709091_g373209_i0 PRJNA940501 374027 153 1.709091 2.61490923 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.013   NTclustered gi|161545|gb|M30606.1|SUSMTA 7668 g373209 i0 100 0.366013071895425 28 0 18 0 122 149 1140 1113 Strongylocentrotus purpuratus (clone lambda-MT206) metallothionein-A (MTA) gene, complete cds blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
8910239 8910239 PRJNA940501_S_NODE_162247_length_206_cov_1.963190_g161429_i0 PRJNA940501 162247 206 1.96319 4.0441714 Lytechinus 7652 Echinodermata other_Eukaryota 52.8 0.018   NTclustered gi|2707422408|ref|XM_054902275.2| 7653 g161429 i0 100 0.271844660194175 28 0 14 0 119 146 3062 3089 PREDICTED: Lytechinus pictus homeobox protein goosecoid-like (LOC129264401), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
8910460 8910460 PRJNA940501_S_NODE_206347_length_191_cov_1.270270_g205529_i0 PRJNA940501 206347 191 1.27027 2.4262157 Metazoa 33208 Echinodermata other_Eukaryota 52.8 0.016   NTclustered gi|1944901264|ref|XM_038207519.1| 46514 g205529 i0 100 1.0261780104712 28 0 15 0 76 103 543 516 PREDICTED: Patiria miniata cdc42-interacting protein 4 homolog (LOC119734169), transcript variant X4, mRNA blastn 196 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
9848531 9848531 PRJNA940501_S_NODE_312968_length_164_cov_11.008264_g312150_i0 PRJNA940501 312968 164 11.008264 18.05355296 Anneissia japonica 1529436 Echinodermata other_Eukaryota 52.8 0.014   NTclustered gi|1826637910|ref|XM_033251062.1| 1529436 g312150 i0 100 0.170731707317073 28 0 17 0 42 69 770 797 PREDICTED: Anneissia japonica cyclin-dependent kinase 2-associated protein 1-like (LOC117108889), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
17500041 17500041 PRJNA940501_S_NODE_67834_length_264_cov_1.108597_g67016_i0 PRJNA940501 67834 264 1.108597 2.92669608 Anneissia japonica 1529436 Echinodermata other_Eukaryota 52.8 0.024   NTclustered gi|1826616444|ref|XM_033241115.1| 1529436 g67016 i0 100 0.53030303030303 28 0 11 0 108 135 1705 1678 PREDICTED: Anneissia japonica GPI mannosyltransferase 3-like (LOC117101204), transcript variant X4, mRNA blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
18772934 18772934 PRJNA940501_S_NODE_391075_length_151_cov_0.870370_g390257_i0 PRJNA940501 391075 151 0.87037 1.3142587 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.012   NTclustered gi|1752377924|ref|XM_030992418.1| 7668 g390257 i0 100 0.185430463576159 28 0 19 0 103 130 3210 3183 PREDICTED: Strongylocentrotus purpuratus calpain-A (LOC100888469), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
20046367 20046367 PRJNA940501_S_NODE_244636_length_180_cov_1.503650_g243818_i0 PRJNA940501 244636 180 1.50365 2.70657 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.015   NTclustered gi|1752358083|ref|XM_781716.5| 7668 g243818 i0 100 0.155555555555556 28 0 16 0 95 122 2992 2965 PREDICTED: Strongylocentrotus purpuratus transcription factor Sox-10 (LOC581729), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
21660147 21660147 PRJNA940501_S_NODE_279017_length_172_cov_1.093023_g278199_i0 PRJNA940501 279017 172 1.093023 1.87999956 Metazoa 33208 Echinodermata other_Eukaryota 56.5 0.001   NTclustered gi|2038006305|ref|XM_041616417.1| 7654 g278199 i0 94.444 0.569767441860465 36 2 21 0 123 158 2645 2680 PREDICTED: Lytechinus variegatus purine nucleoside phosphorylase-like (LOC121421649), mRNA blastn 98 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
23870812 23870812 PRJNA940501_S_NODE_159239_length_207_cov_2.786585_g158421_i0 PRJNA940501 159239 207 2.786585 5.76823095 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 54.7 0.005   NTclustered gi|1752399591|ref|XR_004061782.1| 7668 g158421 i0 100 0.140096618357488 29 0 14 0 12 40 1941 1913 PREDICTED: Strongylocentrotus purpuratus uncharacterized LOC115919287 (LOC115919287), ncRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
23874359 23874359 PRJNA940501_S_NODE_72519_length_259_cov_1.958333_g71701_i0 PRJNA940501 72519 259 1.958333 5.07208247 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 54.7 0.007   NTclustered gi|2037998016|ref|XM_041612056.1| 7654 g71701 i0 96.97 0.127413127413127 33 0 13 1 53 85 3116 3085 PREDICTED: Lytechinus variegatus protein PRRC2C-like (LOC121418277), mRNA blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;