RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA940501" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA940501 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
918168 918168 PRJNA940501_S_NODE_152321_length_210_cov_2.227545_g151503_i0 PRJNA940501 152321 210 2.227545 4.6778445 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 52.8 0.018   NTclustered gi|2202666560|ref|XR_006951441.1| 2897299 g151503 i0 100 0.133333333333333 28 0 13 0 1 28 1 28 PREDICTED: Xenia sp. Carnegie-2017 uncharacterized LOC124454405 (LOC124454405), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
920143 920143 PRJNA940501_S_NODE_28601_length_328_cov_7.564912_g27783_i0 PRJNA940501 28601 328 7.564912 24.81291136 Eunicella cavolini 317547 Cnidaria other_Eukaryota 207 6.22e-49   NTclustered gi|2918369552|emb|OZ237724.1| 317547 g27783 i0 82.627 5.61280487804878 236 39 72 2 35 269 198087 197853 Eunicella cavolini genome assembly, chromosome: 8 blastn 1841 207 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
1257100 1257100 PRJNA940501_S_NODE_109961_length_231_cov_5.712766_g109143_i0 PRJNA940501 109961 231 5.712766 13.19648946 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g109143 i0 100 1.07792207792208 30 0 13 0 84 113 455653 455682 Anemonia sulcata genome assembly, chromosome: 9 blastn 249 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
2196161 2196161 PRJNA940501_S_NODE_34822_length_312_cov_2.144981_g34004_i0 PRJNA940501 34822 312 2.144981 6.69234072 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 52.8 0.029   NTclustered gi|2782930804|ref|XM_067074059.1| 252671 g34004 i0 100 0.0897435897435897 28 0 9 0 139 166 7341 7314 PREDICTED: Clytia hemisphaerica uncharacterized protein (LOC136817746), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
2196465 2196465 PRJNA940501_S_NODE_381402_length_152_cov_1.293578_g380584_i0 PRJNA940501 381402 152 1.293578 1.96623856 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 54.7 0.003   NTclustered gi|1778029042|ref|XM_031695882.1| 6105 g380584 i0 94.286 0.230263157894737 35 2 23 0 50 84 4455 4421 PREDICTED: Actinia tenebrosa laminin subunit alpha-5-like (LOC116289011), mRNA blastn 35 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
2532908 2532908 PRJNA940501_S_NODE_12122_length_432_cov_2.902314_g11316_i0 PRJNA940501 12122 432 2.902314 12.53799648 Metazoa 33208 Cnidaria other_Eukaryota 58.4 8.96e-4   NTclustered gi|2917940712|emb|OZ237560.1| 6108 g11316 i0 100 1.25462962962963 31 0 7 0 104 134 3013367 3013337 Anemonia sulcata genome assembly, chromosome: 6 blastn 542 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
6025427 6025427 PRJNA940501_S_NODE_92685_length_243_cov_1.645000_g91867_i0 PRJNA940501 92685 243 1.645 3.99735 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2917940693|emb|OZ237556.1| 6108 g91867 i0 100 0.11522633744856 28 0 12 0 138 165 3454527 3454500 Anemonia sulcata genome assembly, chromosome: 2 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
7297249 7297249 PRJNA940501_S_NODE_207186_length_191_cov_0.952703_g206368_i0 PRJNA940501 207186 191 0.952703 1.81966273 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 52.8 0.016   NTclustered gi|2518963683|ref|XM_057435745.1| 13093 g206368 i0 100 0.146596858638743 28 0 15 0 120 147 1376 1349 PREDICTED: Hydractinia symbiolongicarpus gamma-glutamyl hydrolase-like (LOC130614317), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
7297841 7297841 PRJNA940501_S_NODE_247666_length_179_cov_1.889706_g246848_i0 PRJNA940501 247666 179 1.889706 3.38257374 Galaxea astreata 154325 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|640940784|gb|KJ591050.1| 154325 g246848 i0 100 0.636871508379888 30 0 17 0 145 174 30 1 Galaxea astreata ferritin mRNA, complete cds blastn 114 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Euphylliidae Galaxea Galaxea astreata
8572334 8572334 PRJNA940501_S_NODE_226827_length_185_cov_1.323944_g226009_i0 PRJNA940501 226827 185 1.323944 2.4492964 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 52.8 0.016   NTclustered gi|1619614858|ref|XM_028657100.1| 2652724 g226009 i0 100 0.151351351351351 28 0 15 0 6 33 679 706 PREDICTED: Exaiptasia diaphana tyramine/octopamine receptor (LOC110232262), transcript variant X16, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
9845585 9845585 PRJNA940501_S_NODE_107668_length_233_cov_1.484211_g106850_i0 PRJNA940501 107668 233 1.484211 3.45821163 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 52.8 0.021   NTclustered gi|2202666560|ref|XR_006951441.1| 2897299 g106850 i0 100 0.120171673819742 28 0 12 0 206 233 28 1 PREDICTED: Xenia sp. Carnegie-2017 uncharacterized LOC124454405 (LOC124454405), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
9849231 9849231 PRJNA940501_S_NODE_386208_length_151_cov_1.740741_g385390_i0 PRJNA940501 386208 151 1.740741 2.62851891 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|2729097479|ref|XM_065211654.1| 499914 g385390 i0 100 0.198675496688742 30 0 20 0 121 150 7136 7107 PREDICTED: Rhopilema esculentum uncharacterized LOC135693239 (LOC135693239), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
11123061 11123061 PRJNA940501_S_NODE_227149_length_185_cov_0.992958_g226331_i0 PRJNA940501 227149 185 0.992958 1.8369723 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.016   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g226331 i0 94.286 0.189189189189189 35 0 18 2 140 172 13742140 13742106 Eunicella cavolini genome assembly, chromosome: 3 blastn 35 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
12398730 12398730 PRJNA940501_S_NODE_239410_length_181_cov_2.376812_g238592_i0 PRJNA940501 239410 181 2.376812 4.30202972 Orbicella faveolata 48498 Cnidaria other_Eukaryota 52.8 0.015   NTclustered gi|1176119690|ref|XM_020775445.1| 48498 g238592 i0 100 0.154696132596685 28 0 15 0 114 141 24617 24590 PREDICTED: Orbicella faveolata uncharacterized LOC110068076 (LOC110068076), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
13675536 13675536 PRJNA940501_S_NODE_70051_length_261_cov_3.211009_g69233_i0 PRJNA940501 70051 261 3.211009 8.38073349 Apolemia rubriversa 1390100 Cnidaria other_Eukaryota 52.8 0.024   NTclustered gi|2554488216|ref|NC_080946.1| 1390100 g69233 i0 96.875 0.122605363984674 32 0 12 1 56 87 8986 8956 Apolemia rubriversa mitochondrion, complete genome blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Siphonophorae Apolemiidae Apolemia Apolemia rubriversa
17497538 17497538 PRJNA940501_S_NODE_216394_length_188_cov_1.296552_g215576_i0 PRJNA940501 216394 188 1.296552 2.43751776 Montipora foliosa 591990 Cnidaria other_Eukaryota 52.8 0.016   NTclustered gi|2812070463|ref|XM_068853481.1| 591990 g215576 i0 100 0.148936170212766 28 0 15 0 71 98 2722 2695 PREDICTED: Montipora foliosa BTB/POZ domain-containing protein 16-like (LOC138006871), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora foliosa
17834682 17834682 PRJNA940501_S_NODE_124314_length_224_cov_1.005525_g123496_i0 PRJNA940501 124314 224 1.005525 2.252376 root 1 Root_unresolved Root_unresolved 58.4 4.28e-4   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g123496 i0 97.059 2.74107142857143 34 1 15 0 51 84 11361163 11361130 Anemonia sulcata genome assembly, chromosome: 9 blastn 614 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
17835671 17835671 PRJNA940501_S_NODE_381014_length_152_cov_1.293578_g380196_i0 PRJNA940501 381014 152 1.293578 1.96623856 Opisthokonta 33154 Cnidaria other_Eukaryota 71.3 3.43e-8   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g380196 i0 93.617 45.3881578947368 47 3 32 0 29 75 25026153 25026199 Eunicella cavolini genome assembly, chromosome: 3 blastn 6899 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
18773963 18773963 PRJNA940501_S_NODE_91415_length_244_cov_1.457711_g90597_i0 PRJNA940501 91415 244 1.457711 3.55681484 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2917940731|emb|OZ237564.1| 6108 g90597 i0 100 0.114754098360656 28 0 11 0 11 38 1349467 1349494 Anemonia sulcata genome assembly, chromosome: 10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
20044370 20044370 PRJNA940501_S_NODE_11776_length_437_cov_2.832487_g10970_i0 PRJNA940501 11776 437 2.832487 12.37796819 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 54.7 0.012   NTclustered gi|1778067835|ref|XM_031715593.1| 6105 g10970 i0 100 0.132723112128146 29 0 7 0 266 294 265 293 PREDICTED: Actinia tenebrosa disks large-associated protein 5-like (LOC116305642), transcript variant X2, mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
21660185 21660185 PRJNA940501_S_NODE_288477_length_170_cov_0.897638_g287659_i0 PRJNA940501 288477 170 0.897638 1.5259846 Zanclea 264063 Cnidaria other_Eukaryota 152 1.36e-32   NTclustered gi|2088706016|gb|MW618871.1| 1519357 g287659 i0 85.714 92.7294117647059 147 17 85 4 1 145 332 188 Zanclea gallii voucher KA074 histone 3 (H3) gene, partial cds blastn 15764 152 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Zancleidae Zanclea Zanclea gallii
22598559 22598559 PRJNA940501_S_NODE_52798_length_281_cov_1.600840_g51980_i0 PRJNA940501 52798 281 1.60084 4.4983604 Anemonia sulcata 6108 Cnidaria other_Eukaryota 62.1 4.3e-5   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g51980 i0 97.222 0.128113879003559 36 1 13 0 233 268 10973660 10973625 Anemonia sulcata genome assembly, chromosome: 18 blastn 36 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
22936038 22936038 PRJNA940501_S_NODE_375398_length_153_cov_1.281818_g374580_i0 PRJNA940501 375398 153 1.281818 1.96118154 Coralliidae 44185 Cnidaria other_Eukaryota 52.8 0.013   NTclustered gi|434090712|gb|JX840714.1| 1221038 g374580 i0 100 0.549019607843137 28 0 18 0 35 62 194 221 Paracorallium sp. 1 NEA-2012 isolate CL34 voucher NIWA:28216 NADH dehydrogenase subunit 6 (ND6) and NADH dehydrogenase subunit 3 (ND3) genes, partial cds; mitochondrial blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Coralliidae Pleurocorallium Paracorallium sp. 1 NEA-2012
23870169 23870169 PRJNA940501_S_NODE_117199_length_227_cov_2.516304_g116381_i0 PRJNA940501 117199 227 2.516304 5.71201008 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 52.8 0.02   NTclustered gi|2202666560|ref|XR_006951441.1| 2897299 g116381 i0 100 0.123348017621145 28 0 12 0 200 227 28 1 PREDICTED: Xenia sp. Carnegie-2017 uncharacterized LOC124454405 (LOC124454405), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
23871007 23871007 PRJNA940501_S_NODE_170459_length_203_cov_1.668750_g169641_i0 PRJNA940501 170459 203 1.66875 3.3875625 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.018   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g169641 i0 100 0.137931034482759 28 0 14 0 115 142 20760757 20760784 Anemonia sulcata genome assembly, chromosome: 3 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
25144153 25144153 PRJNA940501_S_NODE_134220_length_219_cov_1.068182_g133402_i0 PRJNA940501 134220 219 1.068182 2.33931858 Hydra vulgaris 6087 Cnidaria other_Eukaryota 52.8 0.019   NTclustered gi|2744831836|ref|XM_012699837.3| 6087 g133402 i0 100 0.127853881278539 28 0 13 0 181 208 1697 1724 PREDICTED: Hydra vulgaris uncharacterized LOC105843890 (LOC105843890), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
25145167 25145167 PRJNA940501_S_NODE_198240_length_193_cov_2.853333_g197422_i0 PRJNA940501 198240 193 2.853333 5.50693269 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 54.7 0.005   NTclustered gi|2202666560|ref|XR_006951441.1| 2897299 g197422 i0 94.286 0.181347150259067 35 2 18 0 159 193 35 1 PREDICTED: Xenia sp. Carnegie-2017 uncharacterized LOC124454405 (LOC124454405), ncRNA blastn 35 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
25147263 25147263 PRJNA940501_S_NODE_375200_length_153_cov_1.281818_g374382_i0 PRJNA940501 375200 153 1.281818 1.96118154 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.013   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g374382 i0 100 0.183006535947712 28 0 18 0 34 61 5748366 5748393 Anemonia sulcata genome assembly, chromosome: 1 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
25148418 25148418 PRJNA940501_S_NODE_91040_length_244_cov_1.870647_g90222_i0 PRJNA940501 91040 244 1.870647 4.56437868 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940720|emb|OZ237562.1| 6108 g90222 i0 100 0.122950819672131 30 0 12 0 173 202 5177859 5177830 Anemonia sulcata genome assembly, chromosome: 8 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
25484612 25484612 PRJNA940501_S_NODE_314240_length_164_cov_1.942149_g313422_i0 PRJNA940501 314240 164 1.942149 3.18512436 Metazoa 33208 Cnidaria other_Eukaryota 52.8 0.014   NTclustered gi|2917940701|emb|OZ237558.1| 6108 g313422 i0 100 0.341463414634146 28 0 17 0 115 142 12356560 12356533 Anemonia sulcata genome assembly, chromosome: 4 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;