RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA940501" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 12 ✖

bioproject 1

  • PRJNA940501 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
920646 920646 PRJNA940501_S_NODE_335501_length_160_cov_1.606838_g334683_i0 PRJNA940501 335501 160 1.606838 2.5709408 Erythrocytic necrosis virus 1543320 Viruses Viruses 182 1.62e-41   NTclustered gi|1624806707|gb|MK638720.1| 1543320 g334683 i0 91.603 16.59375 131 11 82 0 1 131 235 105 Erythrocytic necrosis virus isolate SEQ_18 putative RNA-dependent DNA polymerase mRNA, partial cds blastn 2655 182 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
2534240 2534240 PRJNA940501_S_NODE_80802_length_252_cov_1.679426_g79984_i0 PRJNA940501 80802 252 1.679426 4.23215352 Alphatectivirus 2169669 Viruses Viruses 424 4.2e-114   NTclustered gi|2693686684|gb|PP412828.1| 3127592 g79984 i0 100 54.8849206349206 229 0 91 0 1 229 1612 1840 Enterobacteria phage PRDcobalt, complete genome blastn 13831 424 1 Viruses   Bamfordvirae Preplasmiviricota Tectiliviricetes Kalamavirales Tectiviridae   Enterobacteria phage PRDcobalt
4747759 4747759 PRJNA940501_S_NODE_226004_length_185_cov_1.535211_g225186_i0 PRJNA940501 226004 185 1.535211 2.84014035 Parapoxvirus orf 3431389 Viruses Viruses 52.8 0.016   NTclustered gi|325073632|gb|HM133903.1| 10258 g225186 i0 100 0.151351351351351 28 0 15 0 2 29 133678 133705 Orf virus strain D1701, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
5085740 5085740 PRJNA940501_S_NODE_168504_length_204_cov_1.167702_g167686_i0 PRJNA940501 168504 204 1.167702 2.38211208 Deltaentomopoxvirus 2733302 Viruses Viruses 52.8 0.018   NTclustered gi|9631294|ref|NC_001993.1| 83191 g167686 i0 100 0.274509803921569 28 0 14 0 22 49 192478 192505 Melanoplus sanguinipes entomopoxvirus, complete genome blastn 56 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Deltaentomopoxvirus Deltaentomopoxvirus msanguinipes
6020686 6020686 PRJNA940501_S_NODE_103405_length_236_cov_0.984456_g102587_i0 PRJNA940501 103405 236 0.984456 2.32331616 Erythrocytic necrosis virus 1543320 Viruses Viruses 361 3.1e-95   NTclustered gi|1624806635|gb|MK638688.1| 1543320 g102587 i0 93.878 7.16101694915254 245 6 100 2 1 236 152 396 Erythrocytic necrosis virus isolate SEQ_16 hypothetical protein mRNA, partial cds blastn 1690 361 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
7636028 7636028 PRJNA940501_S_NODE_274326_length_173_cov_1.084615_g273508_i0 PRJNA940501 274326 173 1.084615 1.87638395 Mimiviridae 549779 Viruses Viruses 52.8 0.015   NTclustered gi|363539767|ref|NC_016072.1| 1094892 g273508 i0 100 1.45664739884393 28 0 16 0 138 165 862557 862584 Megavirus chiliensis, complete genome blastn 252 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Megavirus Megavirus chilense
8571304 8571304 PRJNA940501_S_NODE_158407_length_208_cov_1.169697_g157589_i0 PRJNA940501 158407 208 1.169697 2.43296976 Erythrocytic necrosis virus 1543320 Viruses Viruses 340 3.4699999999999996e-89   NTclustered gi|1624806662|gb|MK638698.1| 1543320 g157589 i0 96.154 5.84615384615385 208 8 100 0 1 208 375 168 Erythrocytic necrosis virus isolate SEQ_13 putative RNA-dependent DNA polymerase mRNA, complete cds blastn 1216 340 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
9848113 9848113 PRJNA940501_S_NODE_275348_length_172_cov_15.372093_g274530_i0 PRJNA940501 275348 172 15.372093 26.43999996 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.004   NTclustered gi|2309594316|gb|OP536747.1| 10244 g274530 i0 100 16.8604651162791 29 0 17 0 69 97 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
17498330 17498330 PRJNA940501_S_NODE_271914_length_173_cov_2.092308_g271096_i0 PRJNA940501 271914 173 2.092308 3.61969284 Megavirus baoshanense 3060196 Viruses Viruses 54.7 0.004   NTclustered gi|2500365504|ref|NC_075367.1| 2496520 g271096 i0 100 0.167630057803468 29 0 17 0 23 51 218853 218825 Megavirus baoshan strain SH, complete genome blastn 29 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Megavirus Megavirus baoshanense
17835477 17835477 PRJNA940501_S_NODE_314614_length_164_cov_1.752066_g313796_i0 PRJNA940501 314614 164 1.752066 2.87338824 Alphatectivirus 2169669 Viruses Viruses 298 1.59e-76   NTclustered gi|2693687230|gb|PP412836.1| 3127600 g313796 i0 99.39 65.0975609756098 164 1 100 0 1 164 1173 1336 Enterobacteria phage PRDhazel, complete genome blastn 10676 298 1 Viruses   Bamfordvirae Preplasmiviricota Tectiliviricetes Kalamavirales Tectiviridae   Enterobacteria phage PRDhazel
21321424 21321424 PRJNA940501_S_NODE_22197_length_352_cov_194.673139_g21379_i0 PRJNA940501 22197 352 194.673139 685.24944928 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.033   NTclustered gi|9964314|ref|NC_002520.1| 28321 g21379 i0 94.286 0.0994318181818182 35 1 10 1 211 244 153509 153475 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
24209076 24209076 PRJNA940501_S_NODE_178839_length_200_cov_1.496815_g178021_i0 PRJNA940501 178839 200 1.496815 2.99363 Alphatectivirus 2169669 Viruses Viruses 370 4.22e-98   NTclustered gi|2127008276|gb|OK041468.1| 2884452 g178021 i0 100 73 200 0 100 0 1 200 1468 1667 Burkholderia phage BCE1, complete genome blastn 14600 370 1 Viruses   Bamfordvirae Preplasmiviricota Tectiliviricetes Kalamavirales Tectiviridae Alphatectivirus Alphatectivirus PRD1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;