contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA940501" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 920573 | 920573 | PRJNA940501_S_NODE_329021_length_161_cov_1.991525_g328203_i0 | PRJNA940501 | 329021 | 161 | 1.991525 | 3.20635525 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 237 | 3.44e-58 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g328203 | i0 | 93.168 | 80.9875776397515 | 161 | 11 | 100 | 0 | 1 | 161 | 1249707 | 1249867 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 13039 | 237 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 2195133 | 2195133 | PRJNA940501_S_NODE_253082_length_178_cov_1.385185_g252264_i0 | PRJNA940501 | 253082 | 178 | 1.3851850000000001 | 2.4656293 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 302 | 1.35e-77 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g252264 | i0 | 97.191 | 80.9101123595506 | 178 | 5 | 100 | 0 | 1 | 178 | 654099 | 653922 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 14402 | 302 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 2534202 | 2534202 | PRJNA940501_S_NODE_73522_length_258_cov_2.186047_g72704_i0 | PRJNA940501 | 73522 | 258 | 2.186047 | 5.64000126 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 270 | 5.9599999999999985e-68 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g72704 | i0 | 85.938 | 86.1356589147287 | 256 | 33 | 99 | 2 | 3 | 257 | 1251234 | 1251487 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 22223 | 272 | 0.992647058823529 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 4748879 | 4748879 | PRJNA940501_S_NODE_312264_length_165_cov_1.155738_g311446_i0 | PRJNA940501 | 312264 | 165 | 1.155738 | 1.9069677 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 215 | 1.66e-51 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g311446 | i0 | 90.361 | 421.012121212121 | 166 | 13 | 100 | 3 | 1 | 165 | 1831079 | 1830916 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 69467 | 215 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 4749516 | 4749516 | PRJNA940501_S_NODE_382004_length_152_cov_1.293578_g381186_i0 | PRJNA940501 | 382004 | 152 | 1.293578 | 1.96623856 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 52.8 | 0.012 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g381186 | i0 | 100 | 6.26315789473684 | 28 | 0 | 18 | 0 | 85 | 112 | 2022288 | 2022261 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 952 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 7636087 | 7636087 | PRJNA940501_S_NODE_290766_length_169_cov_1.492063_g289948_i0 | PRJNA940501 | 290766 | 169 | 1.492063 | 2.52158647 | Bacteria | 2 | Bacteria | Bacteria | 148 | 1.75e-31 | NTclustered | gi|2916408352|gb|CP170455.1| | 2052180 | g289948 | i0 | 83.436 | 447.863905325444 | 163 | 24 | 96 | 3 | 1 | 162 | 1076784 | 1076944 | MAG: Phycisphaerales bacterium isolate tig00000072 chromosome, complete genome | blastn | 75689 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 10186284 | 10186284 | PRJNA940501_S_NODE_201448_length_192_cov_2.825503_g200630_i0 | PRJNA940501 | 201448 | 192 | 2.825503 | 5.42496576 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 291 | 3.22e-74 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g200630 | i0 | 93.814 | 118.53125 | 194 | 10 | 100 | 2 | 1 | 192 | 1250492 | 1250299 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 22758 | 291 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 11461838 | 11461838 | PRJNA940501_S_NODE_311409_length_165_cov_1.155738_g310591_i0 | PRJNA940501 | 311409 | 165 | 1.155738 | 1.9069677 | Bremerella | 2714594 | Bacteria | Bacteria | 178 | 2.18e-40 | NTclustered | gi|1712647354|gb|CP036289.1| | 2527984 | g310591 | i0 | 86.145 | 77.9515151515152 | 166 | 21 | 99 | 2 | 2 | 165 | 2674424 | 2674259 | Bremerella volcania strain Pan97 chromosome, complete genome | blastn | 12862 | 178 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella volcania | |
| 11462050 | 11462050 | PRJNA940501_S_NODE_378069_length_152_cov_3.449541_g377251_i0 | PRJNA940501 | 378069 | 152 | 3.449541 | 5.24330232 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 139 | 9.27e-29 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g377251 | i0 | 85.821 | 3.52631578947368 | 134 | 16 | 88 | 2 | 20 | 152 | 1251181 | 1251312 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 536 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 14947762 | 14947762 | PRJNA940501_S_NODE_257332_length_177_cov_1.246269_g256514_i0 | PRJNA940501 | 257332 | 177 | 1.246269 | 2.20589613 | Planctellipticum variicoloris | 3064265 | Bacteria | Bacteria | 137 | 4.01e-28 | NTclustered | gi|2557458921|gb|CP130886.1| | 3064265 | g256514 | i0 | 81.503 | 16.7118644067797 | 173 | 27 | 96 | 5 | 8 | 177 | 4468173 | 4468343 | Planctellipticum variicoloris strain SH412 chromosome, complete genome | blastn | 2958 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctellipticum | Planctellipticum variicoloris | |
| 18770315 | 18770315 | PRJNA940501_S_NODE_172135_length_202_cov_3.037736_g171317_i0 | PRJNA940501 | 172135 | 202 | 3.037736 | 6.13622672 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 257 | 3.47e-64 | NTclustered | gi|2621705104|emb|OY763327.1| | 2026777 | g171317 | i0 | 93.642 | 119.618811881188 | 173 | 10 | 86 | 1 | 23 | 195 | 1575631 | 1575802 | MAG: Phycisphaeraceae bacterium isolate 55aab3a5-de4e-4c55-acd5-ede7382e386b genome assembly, chromosome: 1 | blastn | 24163 | 257 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 20047557 | 20047557 | PRJNA940501_S_NODE_356456_length_156_cov_1.743363_g355638_i0 | PRJNA940501 | 356456 | 156 | 1.743363 | 2.71964628 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 250 | 4.25e-62 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g355638 | i0 | 95.513 | 159.916666666667 | 156 | 7 | 100 | 0 | 1 | 156 | 1249909 | 1250064 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 24947 | 250 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 22595447 | 22595447 | PRJNA940501_S_NODE_165758_length_205_cov_1.382716_g164940_i0 | PRJNA940501 | 165758 | 205 | 1.382716 | 2.8345678 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 274 | 3.51e-69 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g164940 | i0 | 91.133 | 8.63414634146342 | 203 | 17 | 99 | 1 | 4 | 205 | 1316479 | 1316277 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 1770 | 274 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;