RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA940501" and tax_clade = "Duplodnaviria"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Duplodnaviria · 1 ✖

bioproject 1

  • PRJNA940501 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22594453 22594453 PRJNA940501_S_NODE_102978_length_236_cov_1.461140_g102160_i0 PRJNA940501 102978 236 1.46114 3.4482904 Tunggulvirus f2 2733363 Viruses Viruses 206 1.5399999999999998e-48   NTclustered gi|271277964|emb|FN594518.1| 693582 g102160 i0 83.475 3 236 23 99 8 3 236 41335 41114 Pseudomonas phage phi-2, complete genome, isolated from Pseudomonas fluorescens SBW25 blastn 708 206 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Autographiviridae Tunggulvirus Tunggulvirus f2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;