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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA940501" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 19 ✖

bioproject 1

  • PRJNA940501 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
918969 918969 PRJNA940501_S_NODE_20461_length_361_cov_2.144654_g19643_i0 PRJNA940501 20461 361 2.144654 7.74220094 Acytostelium subglobosum 361139 Evosea other_Eukaryota 121 9.25e-23   NTclustered gi|831753332|ref|XM_012892328.1| 1410327 g19643 i0 82.069 0.803324099722992 145 22 40 3 186 328 782 640 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 290 121 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
2196715 2196715 PRJNA940501_S_NODE_43162_length_295_cov_9.638889_g42344_i0 PRJNA940501 43162 295 9.638889 28.43472255 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 4.45e-20   NTclustered gi|470459156|ref|XM_004341277.1| 1257118 g42344 i0 92.308 6.76271186440678 78 6 26 0 27 104 1089 1166 Acanthamoeba castellanii str. Neff ribosomal protein L3, putative (ACA1_264110), partial mRNA blastn 1995 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3468547 3468547 PRJNA940501_S_NODE_116043_length_228_cov_1.778378_g115225_i0 PRJNA940501 116043 228 1.778378 4.05470184 Acytostelium subglobosum 361139 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|831759414|ref|XM_012894185.1| 1410327 g115225 i0 100 1.00438596491228 29 0 13 0 52 80 109 81 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 229 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
3470854 3470854 PRJNA940501_S_NODE_271083_length_173_cov_5.100000_g270265_i0 PRJNA940501 271083 173 5.1 8.823 Vannella septentrionalis 197531 Discosea other_Eukaryota 281 1.7e-71   NTclustered gi|300078499|gb|GU001161.1| 197531 g270265 i0 95.954 16.6531791907514 173 7 100 0 1 173 1109 937 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2881 281 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
5086568 5086568 PRJNA940501_S_NODE_385824_length_151_cov_1.740741_g385006_i0 PRJNA940501 385824 151 1.740741 2.62851891 Vermamoeba 1260114 Tubulinea other_Eukaryota 279 5.19e-71   NTclustered gi|300078496|gb|GU001158.1| 5778 g385006 i0 100 66.0132450331126 151 0 100 0 1 151 2779 2629 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9968 279 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
6023947 6023947 PRJNA940501_S_NODE_342065_length_159_cov_1.215517_g341247_i0 PRJNA940501 342065 159 1.215517 1.93267203 Dictyostelium purpureum 5786 Evosea other_Eukaryota 128 2.13e-25   NTclustered gi|330805165|ref|XM_003290509.1| 5786 g341247 i0 83.942 4.72327044025157 137 18 85 3 9 143 445 579 Dictyostelium purpureum NADH-ubiquinone oxidoreductase 23 kDa subunit (DICPUDRAFT_89000), partial mRNA blastn 751 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
11121216 11121216 PRJNA940501_S_NODE_108409_length_232_cov_3.354497_g107591_i0 PRJNA940501 108409 232 3.354497 7.78243304 Clastoderma debaryanum 137625 Evosea other_Eukaryota 267 6.809999999999999e-67   NTclustered gi|385258608|gb|JF263592.1| 137625 g107591 i0 88.889 92.0431034482759 216 24 93 0 17 232 241 26 Clastoderma debaryanum elongation factor 1 alpha (EF-1alpha) gene, partial cds blastn 21354 267 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Clastodermataceae Clastoderma Clastoderma debaryanum
11462183 11462183 PRJNA940501_S_NODE_52909_length_281_cov_1.348739_g52091_i0 PRJNA940501 52909 281 1.348739 3.78995659 Trichiidae 208472 Evosea other_Eukaryota 76.8 1.54e-9   NTclustered gi|2250222277|gb|ON713379.1| 647301 g52091 i0 92.453 5.66903914590747 53 4 19 0 1 53 1315 1367 Trichia decipiens voucher MA83070 small subunit ribosomal RNA gene, partial sequence blastn 1593 76.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Trichia Trichia decipiens
11462217 11462217 PRJNA940501_S_NODE_60389_length_271_cov_8.508772_g59571_i0 PRJNA940501 60389 271 8.508772 23.05877212 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 5.34e-4   NTclustered gi|330791506|ref|XM_003283786.1| 5786 g59571 i0 92.5 1.82656826568266 40 3 15 0 79 118 6288 6327 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_45096), partial mRNA blastn 495 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12400499 12400499 PRJNA940501_S_NODE_40250_length_301_cov_1.457364_g39432_i0 PRJNA940501 40250 301 1.457364 4.38666564 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.008   NTclustered gi|166240234|ref|XM_630671.2| 352472 g39432 i0 92.308 0.59468438538206 39 1 12 2 1 37 101 63 Dictyostelium discoideum AX4 RNase P protein subunit (drpp21) mRNA, complete cds blastn 179 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
14950114 14950114 PRJNA940501_S_NODE_8832_length_495_cov_18.805310_g8051_i0 PRJNA940501 8832 495 18.80531 93.0862845 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 200 1.63e-46   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g8051 i0 79.054 9.41818181818182 296 58 59 4 3 296 229 522 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 4662 200 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17835281 17835281 PRJNA940501_S_NODE_256954_length_177_cov_1.402985_g256136_i0 PRJNA940501 256954 177 1.402985 2.48328345 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 3.21e-4   NTclustered gi|66805702|ref|XM_631481.1| 352472 g256136 i0 90.698 1.32203389830508 43 4 24 0 97 139 671 713 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0288683) mRNA, complete cds blastn 234 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
21319599 21319599 PRJNA940501_S_NODE_10557_length_457_cov_10.429952_g9759_i0 PRJNA940501 10557 457 10.429952 47.66488064 Vannellidae sp. 2491907 Discosea other_Eukaryota 226 2.4699999999999993e-54   NTclustered gi|1523769315|gb|MH535957.1| 2491907 g9759 i0 80.769 39.6542669584245 312 41 67 14 112 419 699 403 Vannellidae sp. strain 151-1SVA_C2 18S ribosomal RNA gene, partial sequence; mitochondrial blastn 18122 226 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   Vannellidae sp.
21320387 21320387 PRJNA940501_S_NODE_15377_length_395_cov_8.139205_g14563_i0 PRJNA940501 15377 395 8.139205 32.14985975 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 189 2.7599999999999998e-43   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g14563 i0 79.211 18.2 279 52 70 5 3 278 43 318 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 7189 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22596201 22596201 PRJNA940501_S_NODE_218518_length_187_cov_1.812500_g217700_i0 PRJNA940501 218518 187 1.8125 3.389375 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 207 3.23e-49   NTclustered gi|470455615|ref|XM_004340928.1| 1257118 g217700 i0 86.631 8.19786096256684 187 25 100 0 1 187 369 183 Acanthamoeba castellanii str. Neff ribosomal protein S23 (S12), putative (ACA1_232480), partial mRNA blastn 1533 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23870847 23870847 PRJNA940501_S_NODE_16099_length_389_cov_3.592486_g15284_i0 PRJNA940501 16099 389 3.592486 13.97477054 Protostelium mycophagum 472931 Evosea other_Eukaryota 228 5.749999999999998e-55   NTclustered gi|262262917|gb|FJ766460.1| 472931 g15284 i0 83.665 39.0282776349614 251 31 63 6 143 389 709 953 Protostelium mycophagum strain PRA-128 small subunit ribosomal RNA gene, partial sequence blastn 15182 228 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
23871183 23871183 PRJNA940501_S_NODE_182099_length_199_cov_1.320513_g181281_i0 PRJNA940501 182099 199 1.320513 2.62782087 Vannella septentrionalis 197531 Discosea other_Eukaryota 305 1.2e-78   NTclustered gi|300078499|gb|GU001161.1| 197531 g181281 i0 98.276 87.8643216080402 174 3 87 0 26 199 2274 2447 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17485 305 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
25145591 25145591 PRJNA940501_S_NODE_226200_length_185_cov_1.387324_g225382_i0 PRJNA940501 226200 185 1.387324 2.5665494 Vannella septentrionalis 197531 Discosea other_Eukaryota 309 8.49e-80   NTclustered gi|300078499|gb|GU001161.1| 197531 g225382 i0 96.757 1 185 6 100 0 1 185 1531 1347 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 185 309 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
25484947 25484947 PRJNA940501_S_NODE_53900_length_279_cov_5.072034_g53082_i0 PRJNA940501 53900 279 5.072034 14.15097486 Trichiida 208471 Evosea other_Eukaryota 219 2.3899999999999993e-52   NTclustered gi|2250222240|gb|ON713360.1| 1334559 g53082 i0 85 43.8673835125448 220 28 78 5 4 222 1485 1270 Prototrichia metallica voucher MA80049 small subunit ribosomal RNA gene, partial sequence blastn 12239 220 0.995454545454545 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Prototrichia Prototrichia metallica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;