RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA939415" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA939415 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2532459 2532459 PRJNA939415_P_NODE_85162_length_249_cov_2.835227_g84740_i0 PRJNA939415 85162 249 2.835227 7.05971523 Enterovirus 12059 Viruses Viruses 455 1.47e-123   NTclustered gi|694265777|gb|KM851231.1| 42789 g84740 i0 99.598 99.3212851405623 249 1 100 0 1 249 17 265 Enterovirus D68 strain US/KY/14-18953, complete genome blastn 24731 455 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus deconjuncti
4743951 4743951 PRJNA939415_P_NODE_4644_length_998_cov_2.028108_g4277_i0 PRJNA939415 4644 998 2.028108 20.24051784 Enterovirus deconjuncti 3428506 Viruses Viruses 1844 0   NTclustered gi|694265777|gb|KM851231.1| 42789 g4277 i0 100 99.9609218436874 998 0 100 0 1 998 6244 5247 Enterovirus D68 strain US/KY/14-18953, complete genome blastn 99761 1844 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus deconjuncti
5084884 5084884 PRJNA939415_P_NODE_57524_length_276_cov_2.344828_g57102_i0 PRJNA939415 57524 276 2.344828 6.47172528 Alphavirus 11019 Viruses Viruses 510 3.48e-140   NTclustered gi|2125357852|gb|OK539682.1| 11034 g57102 i0 100 99.6449275362319 276 0 100 0 1 276 4978 5253 Sindbis virus isolate AR339 non-structural polyprotein and structural polyprotein genes, complete cds blastn 27502 510 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus sindbis
7294086 7294086 PRJNA939415_P_NODE_6366_length_717_cov_3.059006_g5965_i0 PRJNA939415 6366 717 3.059006 21.93307302 Enterovirus deconjuncti 3428506 Viruses Viruses 1319 0   NTclustered gi|694265777|gb|KM851231.1| 42789 g5965 i0 99.861 99.931659693166 717 1 100 0 1 717 4527 5243 Enterovirus D68 strain US/KY/14-18953, complete genome blastn 71651 1319 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus deconjuncti
17493405 17493405 PRJNA939415_P_NODE_20794_length_342_cov_1.947955_g20374_i0 PRJNA939415 20794 342 1.947955 6.6620061 Enterovirus deconjuncti 3428506 Viruses Viruses 632 9.079999999999999e-177   NTclustered gi|694265777|gb|KM851231.1| 42789 g20374 i0 100 100.011695906433 342 0 100 0 1 342 404 745 Enterovirus D68 strain US/KY/14-18953, complete genome blastn 34204 632 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus deconjuncti
17494028 17494028 PRJNA939415_P_NODE_5254_length_875_cov_3.733167_g4866_i0 PRJNA939415 5254 875 3.733167 32.66521125 Enterovirus deconjuncti 3428506 Viruses Viruses 1611 0   NTclustered gi|694265777|gb|KM851231.1| 42789 g4866 i0 99.886 100 875 1 100 0 1 875 1751 877 Enterovirus D68 strain US/KY/14-18953, complete genome blastn 87500 1611 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus deconjuncti
18767949 18767949 PRJNA939415_P_NODE_7975_length_584_cov_1.755382_g7559_i0 PRJNA939415 7975 584 1.755382 10.25143088 Enterovirus deconjuncti 3428506 Viruses Viruses 1057 0   NTclustered gi|694265777|gb|KM851231.1| 42789 g7559 i0 99.315 99.9948630136986 584 4 100 0 1 584 2589 3172 Enterovirus D68 strain US/KY/14-18953, complete genome blastn 58397 1057 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus deconjuncti
20041646 20041646 PRJNA939415_P_NODE_17076_length_377_cov_1.638158_g16656_i0 PRJNA939415 17076 377 1.638158 6.17585566 Enterovirus deconjuncti 3428506 Viruses Viruses 697 0   NTclustered gi|694265777|gb|KM851231.1| 42789 g16656 i0 100 100 377 0 100 0 1 377 3505 3881 Enterovirus D68 strain US/KY/14-18953, complete genome blastn 37700 697 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus deconjuncti
20041659 20041659 PRJNA939415_P_NODE_176_length_7555_cov_315.918070_g123_i0 PRJNA939415 176 7555 315.91807 23867.6101885 Norovirus norwalkense 3431196 Viruses Viruses 13570 0   NTclustered gi|2027319263|gb|MW661278.1| 122929 g123 i0 99.087 99.6820648577101 7555 69 100 0 1 7555 7569 15 Norovirus GII isolate BMH19-127, complete genome blastn 753098 13570 1 Viruses Norovirus GII Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae Norovirus Norovirus norwalkense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;