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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA939415" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 4 ✖

bioproject 1

  • PRJNA939415 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14943671 14943671 PRJNA939415_P_NODE_56292_length_277_cov_3.274510_g55870_i0 PRJNA939415 56292 277 3.27451 9.0703927 uncultured delta proteobacterium 34034 Bacteria Bacteria 307 4.9300000000000005e-79   NTclustered gi|2874253674|emb|OY969108.1| 34034 g55870 i0 86.909 1.81227436823105 275 34 99 2 4 277 937908 938181 MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 blastn 502 307 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
14944020 14944020 PRJNA939415_P_NODE_75992_length_258_cov_2.070270_g75570_i0 PRJNA939415 75992 258 2.07027 5.3412966 uncultured delta proteobacterium 34034 Bacteria Bacteria 54.7 0.007   NTclustered gi|2874253674|emb|OY969108.1| 34034 g75570 i0 100 0.437984496124031 29 0 12 0 3 31 2775985 2775957 MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 blastn 113 54.7 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
17494098 17494098 PRJNA939415_P_NODE_56474_length_277_cov_2.598039_g56052_i0 PRJNA939415 56474 277 2.598039 7.19656803 uncultured delta proteobacterium 34034 Bacteria Bacteria 220 6.599999999999998e-53   NTclustered gi|2874253674|emb|OY969108.1| 34034 g56052 i0 81.716 59.2238267148014 268 45 96 2 3 268 328001 328266 MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 blastn 16405 220 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
23867945 23867945 PRJNA939415_P_NODE_43459_length_290_cov_1.958525_g43037_i0 PRJNA939415 43459 290 1.958525 5.6797225 uncultured delta proteobacterium 34034 Bacteria Bacteria 67.6 9.59e-7   NTclustered gi|2874253659|emb|OY969087.1| 34034 g43037 i0 95.238 0.144827586206897 42 2 14 0 230 271 3352737 3352696 MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 blastn 42 67.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;