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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA939415" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 17 ✖

bioproject 1

  • PRJNA939415 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
915122 915122 PRJNA939415_P_NODE_24901_length_310_cov_7.708861_g24479_i0 PRJNA939415 24901 310 7.708861 23.8974691 Ulva prolifera 3117 Plants Plants 76.8 1.72e-9   NTclustered gi|378940381|gb|JN936854.1| 3117 g24479 i0 92.453 2.36451612903226 53 4 17 0 256 308 903 851 Ulva prolifera pyruvate orthophosphate dikinase (PPDK) mRNA, complete cds blastn 733 76.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva prolifera
2191783 2191783 PRJNA939415_P_NODE_91462_length_244_cov_2.602339_g91040_i0 PRJNA939415 91462 244 2.602339 6.34970716 Coccomyxa subellipsoidea 248742 Plants Plants 248 2.6199999999999997e-61   NTclustered gi|545367482|ref|XM_005648504.1| 574566 g91040 i0 91.667 0.737704918032787 180 13 73 2 1 179 567 745 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 180 248 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
3466809 3466809 PRJNA939415_P_NODE_67643_length_266_cov_2.243523_g67221_i0 PRJNA939415 67643 266 2.243523 5.96777118 Paradoxia multiseta 249350 Plants Plants 69.4 2.42e-7   NTclustered gi|723457039|ref|NC_025540.1| 249350 g67221 i0 91.837 0.308270676691729 49 4 18 0 1 49 59917 59965 Paradoxia multiseta culture-collection SAG:18.84 chloroplast, complete genome blastn 82 69.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Paradoxia Paradoxia multiseta
6019069 6019069 PRJNA939415_P_NODE_61945_length_272_cov_1.417085_g61523_i0 PRJNA939415 61945 272 1.417085 3.8544712 Coccomyxa subellipsoidea 248742 Plants Plants 115 3.14e-21   NTclustered gi|545363825|ref|XM_005646955.1| 574566 g61523 i0 89.13 0.338235294117647 92 10 34 0 1 92 147 56 Coccomyxa subellipsoidea C-169 WD40 repeat-like protein partial mRNA blastn 92 115 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
6019342 6019342 PRJNA939415_P_NODE_77625_length_256_cov_3.174863_g77203_i0 PRJNA939415 77625 256 3.174863 8.12764928 Parietochloris pseudoalveolaris 3102 Plants Plants 171 6.16e-38   NTclustered gi|725650801|ref|NC_025532.1| 3102 g77203 i0 84.091 12.1328125 176 28 69 0 80 255 108234 108059 Ettlia pseudoalveolaris culture-collection UTEX:975 chloroplast, complete genome blastn 3106 171 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Parietochloris Parietochloris pseudoalveolaris
6360293 6360293 PRJNA939415_P_NODE_110505_length_204_cov_5.335878_g110083_i0 PRJNA939415 110505 204 5.335878 10.88519112 root 1 Root_unresolved Root_unresolved 377 2.59e-100   NTclustered gi|1714003650|gb|MN243923.1| 3079 g110083 i0 100 99.7058823529412 204 0 100 0 1 204 601 804 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 20340 377 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
9844522 9844522 PRJNA939415_P_NODE_99348_length_235_cov_6.160494_g98926_i0 PRJNA939415 99348 235 6.160494 14.4771609 Ankyra judayi 52688 Plants Plants 110 1.23e-19   NTclustered gi|1011057710|ref|NC_029735.1| 52688 g98926 i0 100 25.5574468085106 59 0 25 0 1 59 77220 77162 Ankyra judayi strain SAG 17.84 chloroplast, complete genome blastn 6006 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Sphaeropleaceae Ankyra Ankyra judayi
11119181 11119181 PRJNA939415_P_NODE_43129_length_290_cov_3.225806_g42707_i0 PRJNA939415 43129 290 3.225806 9.3548374 Trebouxiophyceae sp. MX-AZ01 1208065 Plants Plants 298 3.12e-76   NTclustered gi|409052464|ref|NC_018569.1| 1208065 g42707 i0 85.816 32.2448275862069 282 39 97 1 10 290 89749 89468 Trebouxiophyceae sp. MX-AZ01 chloroplast, complete genome blastn 9351 298 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       Trebouxiophyceae sp. MX-AZ01
11119283 11119283 PRJNA939415_P_NODE_48609_length_285_cov_1.938679_g48187_i0 PRJNA939415 48609 285 1.938679 5.52523515 Coccomyxa subellipsoidea 248742 Plants Plants 300 8.52e-77   NTclustered gi|545354668|ref|XM_005643111.1| 574566 g48187 i0 85.714 1.00701754385965 287 38 99 1 2 285 2211 2497 Coccomyxa subellipsoidea C-169 DUF185-domain-containing protein partial mRNA blastn 287 300 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
13668805 13668805 PRJNA939415_P_NODE_26931_length_310_cov_4.215190_g26509_i0 PRJNA939415 26931 310 4.21519 13.067089 Coccomyxa subellipsoidea 248742 Plants Plants 134 1.01e-26   NTclustered gi|545364299|ref|XM_005647157.1| 574566 g26509 i0 86.667 0.780645161290323 120 16 39 0 6 125 1979 1860 Coccomyxa subellipsoidea C-169 P-loop containing nucleoside triphosphate hydrolase protein partial mRNA blastn 242 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
13669068 13669068 PRJNA939415_P_NODE_41251_length_292_cov_4.785388_g40829_i0 PRJNA939415 41251 292 4.785388 13.97333296 Coccomyxa subellipsoidea 248742 Plants Plants 126 1.57e-24   NTclustered gi|545366727|ref|XM_005648192.1| 574566 g40829 i0 91.304 0.315068493150685 92 8 32 0 21 112 422 331 Coccomyxa subellipsoidea C-169 nucleotide-diphospho-sugar transferase partial mRNA blastn 92 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
17493870 17493870 PRJNA939415_P_NODE_44354_length_289_cov_2.425926_g43932_i0 PRJNA939415 44354 289 2.425926 7.01092614 Coccomyxa subellipsoidea 248742 Plants Plants 80.5 1.23e-10   NTclustered gi|545355381|ref|XM_005643434.1| 574566 g43932 i0 91.379 0.200692041522491 58 5 20 0 1 58 280 337 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 58 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
17494684 17494684 PRJNA939415_P_NODE_91234_length_244_cov_3.543860_g90812_i0 PRJNA939415 91234 244 3.54386 8.6470184 Trebouxiophyceae sp. MX-AZ01 1208065 Plants Plants 211 3.43e-50   NTclustered gi|409052422|ref|NC_018568.1| 1208065 g90812 i0 90.123 0.938524590163934 162 16 66 0 83 244 58058 58219 Trebouxiophyceae sp. MX-AZ01 mitochondrion, complete genome blastn 229 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       Trebouxiophyceae sp. MX-AZ01
20041728 20041728 PRJNA939415_P_NODE_21016_length_340_cov_2.524345_g20596_i0 PRJNA939415 21016 340 2.524345 8.582773 Pseudococcomyxa simplex 464287 Plants Plants 200 1.08e-46   NTclustered gi|1584178652|gb|MK422488.1| 464287 g20596 i0 94.574 0.379411764705882 129 7 38 0 2 130 179 51 Pseudococcomyxa simplex catalase variant Cat4 mRNA, partial cds blastn 129 200 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Oocystaceae Pseudococcomyxa Pseudococcomyxa simplex
20043084 20043084 PRJNA939415_P_NODE_92756_length_243_cov_2.482353_g92334_i0 PRJNA939415 92756 243 2.482353 6.03211779 Chlorella variabilis 554065 Plants Plants 226 1.2199999999999999e-54   NTclustered gi|552848854|ref|XM_005852141.1| 554065 g92334 i0 84.581 6 227 35 93 0 2 228 3943 4169 Chlorella variabilis hypothetical protein (CHLNCDRAFT_133427) mRNA, complete cds blastn 1458 226 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
23867233 23867233 PRJNA939415_P_NODE_109479_length_208_cov_12.555556_g109057_i0 PRJNA939415 109479 208 12.555556 26.11555648 Aphanochaete elegans 764105 Plants Plants 95.3 2.98e-15   NTclustered gi|1834978037|ref|NC_047440.1| 764105 g109057 i0 92.424 0.6875 66 5 32 0 21 86 132675 132610 Aphanochaete elegans chloroplast, complete genome blastn 143 95.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chaetophorales Aphanochaetaceae Aphanochaete Aphanochaete elegans
25141494 25141494 PRJNA939415_P_NODE_34700_length_309_cov_3.101695_g34278_i0 PRJNA939415 34700 309 3.101695 9.58423755 Coccomyxa subellipsoidea 248742 Plants Plants 110 1.69e-19   NTclustered gi|545360537|ref|XM_005645586.1| 574566 g34278 i0 85.714 0.339805825242718 105 13 34 2 3 106 367 470 Coccomyxa subellipsoidea C-169 urea active transporter-like protein 2 partial mRNA blastn 105 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;