RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA939415" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 6 ✖

bioproject 1

  • PRJNA939415 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6019520 6019520 PRJNA939415_P_NODE_87305_length_247_cov_6.028736_g86883_i0 PRJNA939415 87305 247 6.028736 14.89097792 Halalkalicoccus jeotgali 413810 Archaea Archaea 213 9.68e-51   NTclustered gi|299123054|gb|CP002062.1| 795797 g86883 i0 82.52 7.91093117408907 246 39 99 4 4 247 1828131 1827888 Halalkalicoccus jeotgali B3, complete genome blastn 1954 213 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
14943286 14943286 PRJNA939415_P_NODE_34732_length_309_cov_2.944915_g34310_i0 PRJNA939415 34732 309 2.944915 9.09978735 Halalkalicoccus jeotgali 413810 Archaea Archaea 178 4.559999999999999e-40   NTclustered gi|299123054|gb|CP002062.1| 795797 g34310 i0 89.928 1.87378640776699 139 12 45 2 5 142 1266122 1266259 Halalkalicoccus jeotgali B3, complete genome blastn 579 178 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
14943514 14943514 PRJNA939415_P_NODE_47592_length_286_cov_1.906103_g47170_i0 PRJNA939415 47592 286 1.906103 5.45145458 Halalkalicoccus jeotgali 413810 Archaea Archaea 305 1.84e-78   NTclustered gi|299123054|gb|CP002062.1| 795797 g47170 i0 85.859 80.8181818181818 297 30 99 1 1 285 1661771 1661475 Halalkalicoccus jeotgali B3, complete genome blastn 23114 305 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
16219339 16219339 PRJNA939415_P_NODE_90353_length_245_cov_2.366279_g89931_i0 PRJNA939415 90353 245 2.366279 5.79738355 Natronobacterium lacisalsi 229731 Archaea Archaea 60.2 1.32e-4   NTclustered gi|1134496220|gb|CP019285.1| 358396 g89931 i0 100 0.248979591836735 32 0 13 0 202 233 1486483 1486452 Halobiforma lacisalsi AJ5, complete genome blastn 61 60.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronobacterium Natronobacterium lacisalsi
22593218 22593218 PRJNA939415_P_NODE_80578_length_253_cov_3.088889_g80156_i0 PRJNA939415 80578 253 3.088889 7.81488917 Halobacterium zhouii 2902624 Archaea Archaea 56.5 0.002   NTclustered gi|2168769891|gb|CP089593.1| 2902624 g80156 i0 100 0.118577075098814 30 0 12 0 51 80 639538 639509 Halobacterium zhouii strain XZYJT26 chromosome, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium zhouii
23868923 23868923 PRJNA939415_P_NODE_96459_length_240_cov_2.341317_g96037_i0 PRJNA939415 96459 240 2.341317 5.6191608 Halococcus qingdaonensis 224402 Archaea Archaea 383 6.74e-102   NTclustered gi|2281256326|gb|CP101943.1| 224402 g96037 i0 95.781 1.9875 237 10 99 0 1 237 1323181 1323417 Halococcus qingdaonensis strain CGMCC 1.4243 chromosome, complete genome blastn 477 383 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus qingdaonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;