contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA939370" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 914627 | 914627 | PRJNA939370_S_NODE_2581_length_172_cov_0.845528_g2529_i0 | PRJNA939370 | 2581 | 172 | 0.845528 | 1.45430816 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 207 | 2.91e-49 | NTclustered | gi|2108366028|gb|CP070651.1| | 2026798 | g2529 | i0 | 91.892 | 5.86046511627907 | 148 | 12 | 86 | 0 | 24 | 171 | 9426 | 9573 | MAG: Trueperaceae bacterium isolate bin86 chromosome | blastn | 1008 | 207 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 1256161 | 1256161 | PRJNA939370_S_NODE_2941_length_165_cov_1.094828_g2889_i0 | PRJNA939370 | 2941 | 165 | 1.094828 | 1.8064662 | Fervidobacterium | 2422 | Bacteria | Bacteria | 294 | 2.08e-75 | NTclustered | gi|61657861|emb|AJ876542.1| | 2424 | g2889 | i0 | 98.788 | 48.3757575757576 | 165 | 2 | 100 | 0 | 1 | 165 | 191 | 355 | Fervidobacterium nodosum partial 23S rRNA gene | blastn | 7982 | 294 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium nodosum | ||
| 3808172 | 3808172 | PRJNA939370_S_NODE_1203_length_253_cov_1.872549_g1151_i0 | PRJNA939370 | 1203 | 253 | 1.872549 | 4.73754897 | Fervidobacterium | 2422 | Bacteria | Bacteria | 411 | 3.2899999999999995e-110 | NTclustered | gi|61657861|emb|AJ876542.1| | 2424 | g1151 | i0 | 98.283 | 127.897233201581 | 233 | 4 | 92 | 0 | 21 | 253 | 1458 | 1226 | Fervidobacterium nodosum partial 23S rRNA gene | blastn | 32358 | 411 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium nodosum | ||
| 3808183 | 3808183 | PRJNA939370_S_NODE_2123_length_188_cov_1.208633_g2071_i0 | PRJNA939370 | 2123 | 188 | 1.208633 | 2.27223004 | Deinococcus | 1298 | Bacteria | Bacteria | 239 | 1.15e-58 | NTclustered | gi|470486828|ref|NR_076782.1| | 502394 | g2071 | i0 | 91.379 | 158.420212765957 | 174 | 15 | 93 | 0 | 15 | 188 | 1478 | 1651 | Deinococcus gobiensis strain I-0 23S ribosomal RNA gene, complete sequence | blastn | 29783 | 239 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 5084456 | 5084456 | PRJNA939370_S_NODE_1484_length_225_cov_1.971591_g1432_i0 | PRJNA939370 | 1484 | 225 | 1.971591 | 4.43607975 | Fervidobacterium | 2422 | Bacteria | Bacteria | 401 | 1.7199999999999994e-107 | NTclustered | gi|806984310|ref|NG_042008.1| | 2424 | g1432 | i0 | 100 | 280.848888888889 | 217 | 0 | 96 | 0 | 2 | 218 | 2127 | 2343 | Fervidobacterium nodosum strain Rt17-B1 23S ribosomal RNA gene, complete sequence | blastn | 63191 | 401 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium nodosum | ||
| 15284071 | 15284071 | PRJNA939370_S_NODE_1352_length_237_cov_2.696809_g1300_i0 | PRJNA939370 | 1352 | 237 | 2.696809 | 6.39143733 | root | 1 | Root_unresolved | Root_unresolved | 411 | 3.049999999999999e-110 | NTclustered | gi|444439378|ref|NR_074093.1| | 2424 | g1300 | i0 | 99.556 | 102.514767932489 | 225 | 1 | 95 | 0 | 1 | 225 | 513 | 737 | Fervidobacterium nodosum strain Rt17-B1 16S ribosomal RNA, partial sequence | blastn | 24296 | 411 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium nodosum | ||
| 20382472 | 20382472 | PRJNA939370_S_NODE_2936_length_165_cov_1.155172_g2884_i0 | PRJNA939370 | 2936 | 165 | 1.155172 | 1.9060338 | Deinococcus | 1298 | Bacteria | Bacteria | 278 | 2.09e-70 | NTclustered | gi|189305297|gb|EU704886.1| | 158789 | g2884 | i0 | 96.97 | 108 | 165 | 5 | 100 | 0 | 1 | 165 | 854 | 690 | Uncultured Deinococcus sp. clone 1P-1-M01 16S ribosomal RNA gene, partial sequence | blastn | 17820 | 278 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | uncultured Deinococcus sp. | ||
| 22933987 | 22933987 | PRJNA939370_S_NODE_2858_length_166_cov_1.042735_g2806_i0 | PRJNA939370 | 2858 | 166 | 1.042735 | 1.7309401 | Fervidobacterium | 2422 | Bacteria | Bacteria | 289 | 9.729999999999999e-74 | NTclustered | gi|61657861|emb|AJ876542.1| | 2424 | g2806 | i0 | 98.182 | 59.6807228915663 | 165 | 3 | 99 | 0 | 2 | 166 | 1020 | 856 | Fervidobacterium nodosum partial 23S rRNA gene | blastn | 9907 | 289 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium nodosum | ||
| 22933989 | 22933989 | PRJNA939370_S_NODE_2998_length_164_cov_1.486957_g2946_i0 | PRJNA939370 | 2998 | 164 | 1.486957 | 2.43860948 | Fervidobacterium | 2422 | Bacteria | Bacteria | 231 | 1.6399999999999998e-56 | NTclustered | gi|444439378|ref|NR_074093.1| | 2424 | g2946 | i0 | 98.473 | 89.7256097560976 | 131 | 2 | 80 | 0 | 7 | 137 | 344 | 214 | Fervidobacterium nodosum strain Rt17-B1 16S ribosomal RNA, partial sequence | blastn | 14715 | 231 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium nodosum | ||
| 24207738 | 24207738 | PRJNA939370_S_NODE_239_length_550_cov_1.319361_g191_i0 | PRJNA939370 | 239 | 550 | 1.319361 | 7.2564855 | Deinococcus | 1298 | Bacteria | Bacteria | 778 | 0 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g191 | i0 | 92.224 | 206.1 | 553 | 38 | 100 | 3 | 1 | 550 | 2417451 | 2418001 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 113355 | 778 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;