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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA939370" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA939370 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6017841 6017841 PRJNA939370_S_NODE_165_length_641_cov_81.106419_g122_i0 PRJNA939370 165 641 81.106419 519.89214579 Protostelium mycophagum 472931 Evosea other_Eukaryota 920 0   NTclustered gi|262262912|gb|FJ766455.1| 472931 g122 i0 98.106 54.5210608424337 528 10 82 0 112 639 2 529 Protostelium mycophagum strain MFB-b small subunit ribosomal RNA gene, partial sequence blastn 34948 920 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
6017848 6017848 PRJNA939370_S_NODE_205_length_584_cov_48.147664_g158_i0 PRJNA939370 205 584 48.147664 281.18235776 Protostelium mycophagum 472931 Evosea other_Eukaryota 950 0   NTclustered gi|262262910|gb|FJ766453.1| 472931 g158 i0 97.163 57.5479452054795 564 13 96 3 22 584 1107 546 Protostelium mycophagum strain OMBS04-1-1 small subunit ribosomal RNA gene, partial sequence blastn 33608 950 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
7292790 7292790 PRJNA939370_S_NODE_1866_length_200_cov_0.927152_g1814_i0 PRJNA939370 1866 200 0.927152 1.854304 Physarum polycephalum 5791 Evosea other_Eukaryota 315 2.0099999999999999e-81   NTclustered gi|3221|emb|V01159.1| 5791 g1814 i0 95.05 75.635 202 6 99 1 3 200 1900 1699 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 15127 315 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
7292806 7292806 PRJNA939370_S_NODE_386_length_469_cov_19.485714_g334_i0 PRJNA939370 386 469 19.485714 91.38799866 Cavostelium apophysatum 435410 Evosea other_Eukaryota 268 4.16e-67   NTclustered gi|260909290|gb|FJ766476.1| 435410 g334 i0 84.043 38.4051172707889 282 41 59 4 45 323 962 682 Cavostelium apophysatum culture-collection ATCC:38567 clone 9 18S ribosomal RNA gene, partial sequence blastn 18012 268 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Cavostelium Cavostelium apophysatum
8567618 8567618 PRJNA939370_S_NODE_27_length_1130_cov_6.959297_g18_i0 PRJNA939370 27 1130 6.959297 78.6400561 Tubulinea group 04 sp. P18 1215998 Tubulinea other_Eukaryota 1993 0   NTclustered gi|399764278|gb|JQ271789.1| 1215998 g18 i0 98.496 33.4938053097345 1130 17 100 0 1 1130 1141 12 Tubulinea group 04 sp. P18 18S ribosomal RNA gene, partial sequence blastn 37848 1993 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. P18
9842662 9842662 PRJNA939370_S_NODE_1848_length_201_cov_0.973684_g1796_i0 PRJNA939370 1848 201 0.973684 1.95710484 Ripella tribonemae 2047823 Discosea other_Eukaryota 333 5.569999999999999e-87   NTclustered gi|1269228456|gb|MF683581.1| 2047823 g1796 i0 96.552 99.273631840796 203 3 100 3 1 201 299 499 Ripella tribonemae clone 70.1.16 18S ribosomal RNA gene, partial sequence blastn 19954 333 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
9842691 9842691 PRJNA939370_S_NODE_928_length_297_cov_26.524194_g876_i0 PRJNA939370 928 297 26.524194 78.77685618 Protostelium mycophagum 472931 Evosea other_Eukaryota 529 1.0499999999999996e-145   NTclustered gi|262262912|gb|FJ766455.1| 472931 g876 i0 98.983 47.3670033670034 295 3 99 0 1 295 1237 1531 Protostelium mycophagum strain MFB-b small subunit ribosomal RNA gene, partial sequence blastn 14068 529 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
11118328 11118328 PRJNA939370_S_NODE_3369_length_156_cov_5.710280_g3317_i0 PRJNA939370 3369 156 5.71028 8.9080368 Tubulinea sp. 4790 1216002 Tubulinea other_Eukaryota 255 9.12e-64   NTclustered gi|399764273|gb|JQ271784.1| 1216002 g3317 i0 96.154 30.4935897435897 156 6 100 0 1 156 1441 1286 Tubulinea sp. 4790 18S ribosomal RNA gene, partial sequence blastn 4757 255 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4790
12393822 12393822 PRJNA939370_S_NODE_130_length_694_cov_6.254264_g91_i0 PRJNA939370 130 694 6.254264 43.40459216 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 346 2.84e-90   NTclustered gi|511487963|gb|JX898537.1| 1260765 g91 i0 83.812 24.6671469740634 383 43 53 14 262 632 376 1 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 17119 346 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
13668279 13668279 PRJNA939370_S_NODE_1511_length_222_cov_38.086705_g1459_i0 PRJNA939370 1511 222 38.086705 84.5524851 Protostelium mycophagum 472931 Evosea other_Eukaryota 394 2.839999999999999e-105   NTclustered gi|290886113|gb|GU477649.1| 472931 g1459 i0 98.649 101.184684684685 222 3 100 0 1 222 401 180 Protostelium mycophagum strain SI04-01A-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 22463 394 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
18766418 18766418 PRJNA939370_S_NODE_2175_length_186_cov_1.240876_g2123_i0 PRJNA939370 2175 186 1.240876 2.30802936 Didymium iridis 5793 Evosea other_Eukaryota 84.2 5.64e-12   NTclustered gi|2687|emb|X60210.1| 5793 g2123 i0 97.917 0.698924731182796 48 1 26 0 2 49 5216 5263 D.iridis LSU rRNA gene blastn 130 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
20041288 20041288 PRJNA939370_S_NODE_176_length_631_cov_3.214777_g133_i0 PRJNA939370 176 631 3.214777 20.28524287 Protostelium mycophagum 472931 Evosea other_Eukaryota 213 2.72e-50   NTclustered gi|290886113|gb|GU477649.1| 472931 g133 i0 92.053 0.450079239302694 151 12 24 0 477 627 788 638 Protostelium mycophagum strain SI04-01A-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 284 213 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
20041313 20041313 PRJNA939370_S_NODE_636_length_363_cov_30.531847_g584_i0 PRJNA939370 636 363 30.531847 110.83060461 Cavostelium apophysatum 435410 Evosea other_Eukaryota 211 5.37e-50   NTclustered gi|260909290|gb|FJ766476.1| 435410 g584 i0 77.989 17.9807162534435 368 60 99 16 1 362 6 358 Cavostelium apophysatum culture-collection ATCC:38567 clone 9 18S ribosomal RNA gene, partial sequence blastn 6527 211 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Cavostelium Cavostelium apophysatum
21316734 21316734 PRJNA939370_S_NODE_1557_length_219_cov_3.782353_g1505_i0 PRJNA939370 1557 219 3.782353 8.28335307 Tubulinea group 04 sp. P18 1215998 Tubulinea other_Eukaryota 366 6.09e-97   NTclustered gi|399764278|gb|JQ271789.1| 1215998 g1505 i0 96.847 57.1050228310502 222 1 100 6 1 219 1657 1439 Tubulinea group 04 sp. P18 18S ribosomal RNA gene, partial sequence blastn 12506 366 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. P18
21316748 21316748 PRJNA939370_S_NODE_2677_length_169_cov_1.275000_g2625_i0 PRJNA939370 2677 169 1.275 2.15475 Metatrichia vesparium 208474 Evosea other_Eukaryota 82.4 1.8e-11   NTclustered gi|501417089|gb|JX481303.1| 208474 g2625 i0 87.324 0.420118343195266 71 9 42 0 1 71 1785 1715 Metatrichia vesparium voucher DWM7019 18S ribosomal RNA gene, partial sequence blastn 71 82.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Metatrichia Metatrichia vesparium
22591705 22591705 PRJNA939370_S_NODE_1478_length_225_cov_17.107955_g1426_i0 PRJNA939370 1478 225 17.107955 38.49289875 Cavostelium apophysatum 435410 Evosea other_Eukaryota 257 3.95e-64   NTclustered gi|146448820|gb|EF513172.1| 435410 g1426 i0 87.5 99.9555555555555 224 26 99 1 4 225 1388 1611 Cavostelium apophysatum small subunit ribosomal RNA gene, partial sequence blastn 22490 257 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Cavostelium Cavostelium apophysatum
22591708 22591708 PRJNA939370_S_NODE_1718_length_208_cov_25.742138_g1666_i0 PRJNA939370 1718 208 25.742138 53.54364704 Protostelium mycophagum 472931 Evosea other_Eukaryota 298 2.12e-76   NTclustered gi|262262909|gb|FJ766452.1| 472931 g1666 i0 98.235 70.7259615384615 170 3 100 0 39 208 1801 1632 Protostelium mycophagum strain KA-T15-3 small subunit ribosomal RNA gene, partial sequence blastn 14711 298 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
23867078 23867078 PRJNA939370_S_NODE_3419_length_152_cov_6.126214_g3367_i0 PRJNA939370 3419 152 6.126214 9.31184528 Protostelium mycophagum 472931 Evosea other_Eukaryota 259 6.82e-65   NTclustered gi|262262910|gb|FJ766453.1| 472931 g3367 i0 97.368 101.171052631579 152 4 100 0 1 152 1107 1258 Protostelium mycophagum strain OMBS04-1-1 small subunit ribosomal RNA gene, partial sequence blastn 15378 259 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;