contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA939369" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3465253 | 3465253 | PRJNA939369_S_NODE_5383_length_528_cov_4.575824_g4967_i0 | PRJNA939369 | 5383 | 528 | 4.575824 | 24.16035072 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 795 | 0 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g4967 | i0 | 93.785 | 77.907196969697 | 531 | 30 | 100 | 3 | 1 | 528 | 2002824 | 2003354 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 41135 | 795 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 8567555 | 8567555 | PRJNA939369_S_NODE_75087_length_241_cov_1.821429_g74670_i0 | PRJNA939369 | 75087 | 241 | 1.821429 | 4.38964389 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 412 | 8.64e-111 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g74670 | i0 | 97.51 | 112.423236514523 | 241 | 6 | 100 | 0 | 1 | 241 | 735640 | 735880 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 27094 | 412 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8908872 | 8908872 | PRJNA939369_S_NODE_18967_length_343_cov_2.959259_g18550_i0 | PRJNA939369 | 18967 | 343 | 2.959259 | 10.15025837 | Akkermansia | 239934 | Bacteria | Bacteria | 573 | 5.599999999999998e-159 | NTclustered | gi|2051360498|gb|CP072032.1| | 239935 | g18550 | i0 | 96.793 | 296 | 343 | 11 | 100 | 0 | 1 | 343 | 395293 | 394951 | Akkermansia muciniphila strain Akk1613 chromosome, complete genome | blastn | 101528 | 573 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 8908881 | 8908881 | PRJNA939369_S_NODE_22207_length_327_cov_2.791339_g21790_i0 | PRJNA939369 | 22207 | 327 | 2.791339 | 9.12767853 | Gemmataceae | 1914233 | Bacteria | Bacteria | 453 | 7.210000000000001e-123 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g21790 | i0 | 91.743 | 130.834862385321 | 327 | 25 | 100 | 2 | 1 | 327 | 1034777 | 1035101 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 42783 | 455 | 0.995604395604396 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 9842216 | 9842216 | PRJNA939369_S_NODE_19488_length_340_cov_2.741573_g19071_i0 | PRJNA939369 | 19488 | 340 | 2.741573 | 9.3213482 | Rubellicoccus peritrichatus | 3080537 | Bacteria | Bacteria | 309 | 1.7300000000000003e-79 | NTclustered | gi|2605121622|gb|CP136920.1| | 3080537 | g19071 | i0 | 83.988 | 184.055882352941 | 331 | 43 | 96 | 9 | 1 | 326 | 2161657 | 2161982 | Rubellicoccus peritrichatus strain CR14 isolate coral tank chromosome, complete genome | blastn | 62579 | 309 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Rubellicoccus | Rubellicoccus peritrichatus | |
| 11118007 | 11118007 | PRJNA939369_S_NODE_38129_length_280_cov_2.130435_g37712_i0 | PRJNA939369 | 38129 | 280 | 2.130435 | 5.965218 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 496 | 9.92e-136 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g37712 | i0 | 98.571 | 109.475 | 280 | 4 | 100 | 0 | 1 | 280 | 1250535 | 1250814 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 30653 | 496 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 13667855 | 13667855 | PRJNA939369_S_NODE_18671_length_345_cov_1.470588_g18254_i0 | PRJNA939369 | 18671 | 345 | 1.470588 | 5.0735286 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 363 | 1.33e-95 | NTclustered | gi|2225500096|gb|CP095464.1| | 2026799 | g18254 | i0 | 87.077 | 331.91884057971 | 325 | 36 | 93 | 6 | 1 | 322 | 594236 | 594557 | MAG: Verrucomicrobia bacterium isolate LL51 chromosome, complete genome | blastn | 114512 | 363 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 14942427 | 14942427 | PRJNA939369_S_NODE_61652_length_248_cov_0.880000_g61235_i0 | PRJNA939369 | 61652 | 248 | 0.88 | 2.1824 | uncultured Opitutaceae bacterium | 333967 | Bacteria | Bacteria | 106 | 1.7e-18 | NTclustered | gi|2518551946|emb|OX638348.1| | 333967 | g61235 | i0 | 75.833 | 4.23387096774194 | 240 | 41 | 94 | 15 | 16 | 248 | 4609834 | 4609605 | MAG: uncultured Opitutaceae bacterium isolate b1b57f99-08c0-43d1-969e-fd0ef39b1292 genome assembly, chromosome: 1 | blastn | 1050 | 106 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | uncultured Opitutaceae bacterium | ||
| 16217244 | 16217244 | PRJNA939369_S_NODE_2833_length_674_cov_5.935108_g2437_i0 | PRJNA939369 | 2833 | 674 | 5.935108 | 40.00262792 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 1201 | 0 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g2437 | i0 | 98.813 | 119.197329376855 | 674 | 8 | 100 | 0 | 1 | 674 | 1092265 | 1092938 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 80339 | 1201 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 16558579 | 16558579 | PRJNA939369_S_NODE_3933_length_593_cov_4.084615_g3527_i0 | PRJNA939369 | 3933 | 593 | 4.084615 | 24.22176695 | Akkermansia | 239934 | Bacteria | Bacteria | 1085 | 0 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g3527 | i0 | 99.663 | 296 | 593 | 2 | 100 | 0 | 1 | 593 | 137908 | 137316 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 175528 | 1085 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 18766104 | 18766104 | PRJNA939369_S_NODE_43235_length_270_cov_1.172589_g42818_i0 | PRJNA939369 | 43235 | 270 | 1.172589 | 3.1659903 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 346 | 1.01e-90 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g42818 | i0 | 90.637 | 127.751851851852 | 267 | 15 | 97 | 7 | 4 | 264 | 1316478 | 1316740 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 34493 | 346 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18766313 | 18766313 | PRJNA939369_S_NODE_68755_length_244_cov_1.426901_g68338_i0 | PRJNA939369 | 68755 | 244 | 1.426901 | 3.48163844 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 200 | 7.4299999999999985e-47 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g68338 | i0 | 81.855 | 89.0081967213115 | 248 | 36 | 100 | 6 | 1 | 244 | 1866433 | 1866675 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 21718 | 200 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 20041227 | 20041227 | PRJNA939369_S_NODE_73236_length_242_cov_1.284024_g72819_i0 | PRJNA939369 | 73236 | 242 | 1.284024 | 3.10733808 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 392 | 1.1299999999999999e-104 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g72819 | i0 | 95.885 | 204.107438016529 | 243 | 8 | 100 | 2 | 1 | 242 | 1315546 | 1315787 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 49394 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21316265 | 21316265 | PRJNA939369_S_NODE_16157_length_361_cov_1.479167_g15740_i0 | PRJNA939369 | 16157 | 361 | 1.479167 | 5.33979287 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 623 | 5.779999999999999e-174 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g15740 | i0 | 97.784 | 137.02216066482 | 361 | 8 | 100 | 0 | 1 | 361 | 2003835 | 2003475 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 49465 | 623 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 21316420 | 21316420 | PRJNA939369_S_NODE_41157_length_274_cov_1.437811_g40740_i0 | PRJNA939369 | 41157 | 274 | 1.437811 | 3.93960214 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 368 | 2.1999999999999996e-97 | NTclustered | gi|2225500096|gb|CP095464.1| | 2026799 | g40740 | i0 | 91.144 | 133.890510948905 | 271 | 24 | 99 | 0 | 4 | 274 | 594369 | 594639 | MAG: Verrucomicrobia bacterium isolate LL51 chromosome, complete genome | blastn | 36686 | 368 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 21316439 | 21316439 | PRJNA939369_S_NODE_43297_length_270_cov_1.126904_g42880_i0 | PRJNA939369 | 43297 | 270 | 1.126904 | 3.0426408 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 291 | 4.82e-74 | NTclustered | gi|2225500096|gb|CP095464.1| | 2026799 | g42880 | i0 | 86.296 | 159.3 | 270 | 34 | 100 | 3 | 1 | 270 | 594661 | 594927 | MAG: Verrucomicrobia bacterium isolate LL51 chromosome, complete genome | blastn | 43011 | 291 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 21658318 | 21658318 | PRJNA939369_S_NODE_2057_length_769_cov_4.298851_g1685_i0 | PRJNA939369 | 2057 | 769 | 4.298851 | 33.05816419 | Gemmataceae | 1914233 | Bacteria | Bacteria | 1254 | 0 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g1685 | i0 | 96.224 | 174.561768530559 | 768 | 25 | 99 | 3 | 1 | 766 | 3634444 | 3633679 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 134238 | 1260 | 0.995238095238095 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;