RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA939369" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA939369 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
914500 914500 PRJNA939369_S_NODE_66781_length_245_cov_1.343023_g66364_i0 PRJNA939369 66781 245 1.343023 3.29040635 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 69.4 2.2e-7   NTclustered gi|2874253989|emb|OY970314.1| 2026804 g66364 i0 85.938 1.76326530612245 64 9 26 0 31 94 624553 624616 MAG: Candidatus Woesebacteria bacterium isolate MFD01299.bin.c.5 genome assembly, chromosome: 1 blastn 432 69.4 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
10184813 10184813 PRJNA939369_S_NODE_67068_length_245_cov_0.941860_g66651_i0 PRJNA939369 67068 245 0.94186 2.307557 Bacteria 2 Bacteria Bacteria 228 3.4199999999999995e-55   NTclustered gi|1958075319|gb|CP064995.1| 2026720 g66651 i0 83.673 97.8775510204082 245 36 99 4 3 245 693009 692767 Candidatus Saccharibacteria bacterium isolate Hjor_18-Q3-R7-51_MAXAC.102_uni chromosome, complete genome blastn 23980 228 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;