RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA938397" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA938397 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2188665 2188665 PRJNA938397_S_NODE_34802_length_187_cov_2.933333_g34561_i0 PRJNA938397 34802 187 2.933333 5.48533271 Pomacea canaliculata 400727 Mollusca Mollusca 58.4 3.44e-4   NTclustered gi|1397677502|ref|XM_025234711.1| 400727 g34561 i0 90.909 0.705882352941177 44 3 24 1 137 180 4688 4646 PREDICTED: Pomacea canaliculata GATOR complex protein DEPDC5-like (LOC112561883), transcript variant X1, mRNA blastn 132 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
4742164 4742164 PRJNA938397_S_NODE_48444_length_157_cov_5.925000_g48203_i0 PRJNA938397 48444 157 5.925 9.30225 Octopus sinensis 2607531 Mollusca Mollusca 52.8 0.013   NTclustered gi|1914623554|ref|XM_029802429.2| 2607531 g48203 i0 100 0.178343949044586 28 0 18 0 86 113 3445 3472 PREDICTED: Octopus sinensis GTP-binding protein Rhes (LOC115232520), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
6017303 6017303 PRJNA938397_S_NODE_7845_length_367_cov_8.269697_g7604_i0 PRJNA938397 7845 367 8.269697 30.34978799 Gigantopelta aegis 1735272 Mollusca Mollusca 233 1.16e-56   NTclustered gi|2034294411|ref|XM_041521742.1| 1735272 g7604 i0 82.353 25.7384196185286 272 44 74 4 82 351 414 145 PREDICTED: Gigantopelta aegis dynein light chain 2, cytoplasmic-like (LOC121390037), transcript variant X2, mRNA blastn 9446 233 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
8566258 8566258 PRJNA938397_S_NODE_35887_length_184_cov_2.149660_g35646_i0 PRJNA938397 35887 184 2.14966 3.9553744 Argopecten irradians 31199 Mollusca Mollusca 65.8 2.02e-6   NTclustered gi|2835384318|ref|XM_069266836.1| 31199 g35646 i0 88.679 0.809782608695652 53 6 29 0 43 95 435 383 PREDICTED: Argopecten irradians epsin-2-like (LOC138322751), transcript variant X1, mRNA blastn 149 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
13666039 13666039 PRJNA938397_S_NODE_14171_length_290_cov_18.577075_g13930_i0 PRJNA938397 14171 290 18.577075 53.8735175 Saccostrea cuccullata 36930 Mollusca Mollusca 189 1.9599999999999993e-43   NTclustered gi|2669115674|ref|XM_062734844.1| 36930 g13930 i0 80.658 3.6448275862069 243 47 84 0 47 289 667 425 PREDICTED: Saccostrea cucullata NADH-ubiquinone oxidoreductase subunit 8-like (LOC134252379), mRNA blastn 1057 189 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
16215684 16215684 PRJNA938397_S_NODE_20893_length_242_cov_2.892683_g20652_i0 PRJNA938397 20893 242 2.892683 7.00029286 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912999222|dbj|AP039605.1| 145626 g20652 i0 100 0.12396694214876 30 0 12 0 187 216 27714320 27714349 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 24, sequence blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
16216670 16216670 PRJNA938397_S_NODE_4513_length_432_cov_81.762025_g4290_i0 PRJNA938397 4513 432 81.762025 353.211948 Lottia gigantea 225164 Mollusca Mollusca 285 3.7799999999999995e-72   NTclustered gi|676421266|ref|XM_009045548.1| 225164 g4290 i0 81.503 47.5578703703704 346 64 80 0 1 346 841 1186 Lottia gigantea hypothetical protein mRNA blastn 20545 285 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
23866400 23866400 PRJNA938397_S_NODE_5579_length_409_cov_21.779570_g5346_i0 PRJNA938397 5579 409 21.77957 89.0784413 Ruditapes philippinarum 129788 Mollusca Mollusca 233 1.3099999999999998e-56   NTclustered gi|2616585034|ref|XM_060721976.1| 129788 g5346 i0 85.586 41.7823960880196 222 32 54 0 187 408 1673 1452 PREDICTED: Ruditapes philippinarum calcium-binding protein LPS1-alpha-like (LOC132735073), mRNA blastn 17089 233 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;