RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA938397" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA938397 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
913009 913009 PRJNA938397_S_NODE_28301_length_207_cov_9.570588_g28060_i0 PRJNA938397 28301 207 9.570588 19.81111716 Anneissia japonica 1529436 Echinodermata other_Eukaryota 56.5 0.001   NTclustered gi|1826630803|ref|XM_033248070.1| 1529436 g28060 i0 100 0.144927536231884 30 0 14 0 3 32 267 238 PREDICTED: Anneissia japonica amiloride-sensitive sodium channel subunit gamma-2-like (LOC117106671), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
8565533 8565533 PRJNA938397_S_NODE_17427_length_264_cov_2.951542_g17186_i0 PRJNA938397 17427 264 2.951542 7.79207088 Anneissia japonica 1529436 Echinodermata other_Eukaryota 172 1.77e-38   NTclustered gi|1826662880|ref|XM_033263433.1| 1529436 g17186 i0 82.266 2.21969696969697 203 32 76 4 23 223 244 444 PREDICTED: Anneissia japonica dynein light chain LC6, flagellar outer arm (LOC117118750), mRNA blastn 586 172 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;