contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA938397" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2531715 | 2531715 | PRJNA938397_S_NODE_7142_length_378_cov_90.642229_g6903_i0 | PRJNA938397 | 7142 | 378 | 90.642229 | 342.62762562 | root | 1 | Root_unresolved | Root_unresolved | 634 | 2.809999999999999e-177 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g6903 | i0 | 99.711 | 41.3624338624339 | 346 | 1 | 92 | 0 | 32 | 377 | 2426808 | 2426463 | Staphylococcus aureus strain WH9628 chromosome | blastn | 15635 | 634 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 7634149 | 7634149 | PRJNA938397_S_NODE_46726_length_160_cov_5.406504_g46485_i0 | PRJNA938397 | 46726 | 160 | 5.406504 | 8.6504064 | Clostridioides | 1870884 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2616322045|gb|CP133835.1| | 1496 | g46485 | i0 | 100 | 18.75 | 30 | 0 | 19 | 0 | 1 | 30 | 2406883 | 2406854 | Clostridioides difficile strain RSS2 chromosome, complete genome | blastn | 3000 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 7634155 | 7634155 | PRJNA938397_S_NODE_52806_length_150_cov_16.840708_g52565_i0 | PRJNA938397 | 52806 | 150 | 16.840708 | 25.261062 | Clostridioides | 1870884 | Bacteria | Bacteria | 52.8 | 0.012 | NTclustered | gi|1498414890|gb|CP033216.1| | 1496 | g52565 | i0 | 100 | 7.09333333333333 | 28 | 0 | 19 | 0 | 60 | 87 | 571032 | 571059 | Clostridioides difficile strain CD21062 chromosome, complete genome | blastn | 1064 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 14009979 | 14009979 | PRJNA938397_S_NODE_21831_length_236_cov_9.804020_g21590_i0 | PRJNA938397 | 21831 | 236 | 9.80402 | 23.1374872 | Staphylococcus | 1279 | Bacteria | Bacteria | 387 | 5.11e-103 | NTclustered | gi|2814765382|gb|CP170661.1| | 1282 | g21590 | i0 | 97.357 | 509.843220338983 | 227 | 6 | 96 | 0 | 10 | 236 | 793298 | 793072 | Staphylococcus epidermidis strain CCARM 3A686 chromosome, complete genome | blastn | 120323 | 387 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 16558501 | 16558501 | PRJNA938397_S_NODE_37033_length_181_cov_3.222222_g36792_i0 | PRJNA938397 | 37033 | 181 | 3.222222 | 5.83222182 | Abiotrophia | 46123 | Bacteria | Bacteria | 327 | 2.2799999999999996e-85 | NTclustered | gi|1848537030|gb|CP053988.1| | 46125 | g36792 | i0 | 99.448 | 562.016574585635 | 181 | 0 | 100 | 1 | 1 | 181 | 863613 | 863434 | Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome | blastn | 101725 | 327 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Abiotrophia | Abiotrophia defectiva | ||
| 18764341 | 18764341 | PRJNA938397_S_NODE_18935_length_253_cov_19.393519_g18694_i0 | PRJNA938397 | 18935 | 253 | 19.393519 | 49.06560307 | Clostridium intestinale | 36845 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|1880427247|gb|CP059378.1| | 36845 | g18694 | i0 | 100 | 0.221343873517787 | 28 | 0 | 11 | 0 | 143 | 170 | 3081708 | 3081681 | Clostridium intestinale strain Lx1 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium intestinale | ||
| 24207564 | 24207564 | PRJNA938397_S_NODE_12859_length_303_cov_6.785714_g12618_i0 | PRJNA938397 | 12859 | 303 | 6.785714 | 20.56071342 | Streptococcus | 1301 | Bacteria | Bacteria | 560 | 3.79e-155 | NTclustered | gi|1948677368|gb|CP066059.1| | 1303 | g12618 | i0 | 100 | 339 | 303 | 0 | 100 | 0 | 1 | 303 | 951385 | 951687 | Streptococcus oralis strain FDAARGOS_1021 chromosome, complete genome | blastn | 102717 | 560 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;