RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA938397" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA938397 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1255970 1255970 PRJNA938397_S_NODE_21921_length_236_cov_4.055276_g21680_i0 PRJNA938397 21921 236 4.055276 9.57045136 Penicillium 5073 Fungi Fungi 89.8 1.61e-13   NTclustered gi|2517659489|ref|XM_057143745.1| 1167516 g21680 i0 96.296 0.889830508474576 54 2 23 0 174 227 216 163 Penicillium odoratum uncharacterized protein (N7520_009811), partial mRNA blastn 210 89.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium odoratum
6016180 6016180 PRJNA938397_S_NODE_27245_length_211_cov_12.551724_g27004_i0 PRJNA938397 27245 211 12.551724 26.48413764 Kazachstania africana 432096 Fungi Fungi 300 5.99e-77   NTclustered gi|1199862363|ref|XR_002430158.1| 1071382 g27004 i0 94.792 101.24644549763 192 10 91 0 15 206 3201 3392 Kazachstania africana CBS 2517 25S ribosomal RNA (Kafr_RDN25-1), rRNA blastn 21363 300 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Kazachstania Kazachstania africana
6016445 6016445 PRJNA938397_S_NODE_33805_length_189_cov_9.526316_g33564_i0 PRJNA938397 33805 189 9.526316 18.00473724 Cyberlindnera jadinii 4903 Fungi Fungi 296 6.79e-76   NTclustered gi|1821108737|gb|MT192755.1| 4903 g33564 i0 99.387 86.1428571428571 163 1 86 0 2 164 107 269 Cyberlindnera jadinii isolate 2Y50 large subunit ribosomal RNA gene, partial sequence blastn 16281 296 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Phaffomycetaceae Cyberlindnera Cyberlindnera jadinii
7290850 7290850 PRJNA938397_S_NODE_21006_length_241_cov_6.450980_g20765_i0 PRJNA938397 21006 241 6.45098 15.5468618 Cercospora beticola 122368 Fungi Fungi 60.2 1.3e-4   NTclustered gi|2741420349|ref|XM_023604034.2| 122368 g20765 i0 94.872 12.5726141078838 39 1 16 1 2 39 3090 3128 Cercospora beticola uncharacterized protein (RHO25_012735), partial mRNA blastn 3030 60.2 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Cercospora Cercospora beticola
9841105 9841105 PRJNA938397_S_NODE_30508_length_200_cov_1.159509_g30267_i0 PRJNA938397 30508 200 1.159509 2.319018 Lipomyces tetrasporus 54092 Fungi Fungi 52.8 0.017   NTclustered gi|2507625475|ref|XM_056187432.1| 54092 g30267 i0 100 0.14 28 0 14 0 73 100 1178 1151 Lipomyces tetrasporus uncharacterized protein (POJ06DRAFT_251706), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Lipomycetes Lipomycetales Lipomycetaceae Lipomyces Lipomyces tetrasporus
13667310 13667310 PRJNA938397_S_NODE_44691_length_164_cov_3.118110_g44450_i0 PRJNA938397 44691 164 3.11811 5.1137004 Asterina chrysophylli 1651222 Fungi Fungi 80.5 6.28e-11   NTclustered gi|827195252|gb|KP143738.1| 1651222 g44450 i0 79.487 29.9451219512195 117 20 70 3 2 116 217 103 Asterina chrysophylli strain VIC 42823 28S ribosomal RNA gene, partial sequence blastn 4911 80.5 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Asterinales Asterinaceae Asterina Asterina chrysophylli
15283911 15283911 PRJNA938397_S_NODE_20392_length_244_cov_30.212560_g20151_i0 PRJNA938397 20392 244 30.21256 73.7186464 Fungi 4751 Fungi Fungi 387 5.31e-103   NTclustered gi|451991414|gb|JX134665.1| 42149 g20151 i0 99.531 87.2950819672131 213 0 87 1 33 244 929 717 Pseudohalonectria lignicola strain M95 18S ribosomal RNA gene, partial sequence blastn 21300 387 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Magnaporthales Ophioceraceae Pseudohalonectria Pseudohalonectria lignicola
16558522 16558522 PRJNA938397_S_NODE_7633_length_370_cov_69.231231_g7392_i0 PRJNA938397 7633 370 69.231231 256.1555547 Cylindrium 318858 Fungi Fungi 676 0   NTclustered gi|313483127|gb|HQ433132.1| 175243 g7392 i0 100 98.2486486486487 366 0 99 0 1 366 713 348 Uncultured Ascomycota clone asc07195 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36352 676 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
17491253 17491253 PRJNA938397_S_NODE_27614_length_210_cov_4.514451_g27373_i0 PRJNA938397 27614 210 4.514451 9.4803471 Ocellularia praestans 1232515 Fungi Fungi 78.7 3.04e-10   NTclustered gi|406858566|gb|JX421583.1| 1232515 g27373 i0 95.833 19.5047619047619 48 2 23 0 163 210 340 293 Ocellularia praestans voucher Luecking 32236 28S ribosomal RNA gene, partial sequence blastn 4096 78.7 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Ostropales Graphidaceae Ocellularia Ocellularia praestans
17491379 17491379 PRJNA938397_S_NODE_30834_length_199_cov_1.382716_g30593_i0 PRJNA938397 30834 199 1.382716 2.75160484 Cyberlindnera jadinii 4903 Fungi Fungi 302 1.55e-77   NTclustered gi|1147433434|ref|XM_020217210.1| 983966 g30593 i0 100 0.819095477386935 163 0 82 0 37 199 359 197 Cyberlindnera jadinii NRRL Y-1542 60S ribosomal protein eL39 (CYBJADRAFT_186340), partial mRNA blastn 163 302 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Phaffomycetaceae Cyberlindnera Cyberlindnera jadinii
17491391 17491391 PRJNA938397_S_NODE_31174_length_197_cov_12.843750_g30933_i0 PRJNA938397 31174 197 12.84375 25.3021875 Wickerhamomyces anomalus 4927 Fungi Fungi 128 2.76e-25   NTclustered gi|1102229961|ref|XM_019184630.1| 683960 g30933 i0 89.899 7.46192893401015 99 10 50 0 22 120 1221 1319 Wickerhamomyces anomalus NRRL Y-366-8 alpha-tubulin TUB1 (WICANDRAFT_77894), partial mRNA blastn 1470 128 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Wickerhamomycetaceae Wickerhamomyces Wickerhamomyces anomalus
19107377 19107377 PRJNA938397_S_NODE_41435_length_170_cov_10.721805_g41194_i0 PRJNA938397 41435 170 10.721805 18.2270685 Sordariomycetes 147550 Fungi Fungi 285 1.29e-72   NTclustered gi|63169502|gb|AY969207.1| 175243 g41194 i0 100 90.5823529411765 154 0 91 0 1 154 528 375 Uncultured ascomycete isolate dfmo4344.094 18S ribosomal RNA gene, partial sequence blastn 15399 285 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
19107379 19107379 PRJNA938397_S_NODE_42075_length_169_cov_4.696970_g41834_i0 PRJNA938397 42075 169 4.69697 7.9378793 Ascomycota 4890 Fungi Fungi 239 1.01e-58   NTclustered gi|1473255798|gb|MH868742.1| 5074 g41834 i0 97.826 81.6568047337278 138 3 82 0 32 169 309 172 Penicillium brevicompactum culture CBS:287.53 strain CBS 287.53 large subunit ribosomal RNA gene, partial sequence blastn 13800 239 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium brevicompactum
21658255 21658255 PRJNA938397_S_NODE_28197_length_208_cov_1.748538_g27956_i0 PRJNA938397 28197 208 1.748538 3.63695904 Trichomeriaceae 1233474 Fungi Fungi 333 5.809999999999999e-87   NTclustered gi|794346446|gb|KP174920.1| 1628654 g27956 i0 100 86.375 180 0 87 0 3 182 48 227 Bradymyces sp. LS-2015b culture-collection CGMCC:3.17223 28S ribosomal RNA gene, partial sequence blastn 17966 333 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Bradymyces Bradymyces sp. LS-2015b
22589922 22589922 PRJNA938397_S_NODE_25998_length_216_cov_12.715084_g25757_i0 PRJNA938397 25998 216 12.715084 27.46458144 Neoarthrinium moseri 1658444 Fungi Fungi 54.7 0.005   NTclustered gi|2272141558|ref|XM_049314591.1| 1658444 g25757 i0 100 0.263888888888889 29 0 13 0 82 110 1522 1494 Wardomyces moseri uncharacterized protein (JN550_003212), partial mRNA blastn 57 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Amphisphaeriales Apiosporaceae Neoarthrinium Neoarthrinium moseri

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;