RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA934332" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA934332 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2185948 2185948 PRJNA934332_P_NODE_4022_length_326_cov_1.213439_g3935_i0 PRJNA934332 4022 326 1.213439 3.95581114 Lichtheimia ornata 688661 Fungi Fungi 148 3.8e-31   NTclustered gi|2553553037|ref|XM_058481266.1| 688661 g3935 i0 77.432 0.788343558282209 257 52 78 6 30 283 1 254 Lichtheimia ornata uncharacterized protein (O0I10_001169), partial mRNA blastn 257 148 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
11114241 11114241 PRJNA934332_P_NODE_2649_length_385_cov_1.169872_g2562_i0 PRJNA934332 2649 385 1.169872 4.5040072 Lichtheimia ornata 688661 Fungi Fungi 215 4.43e-51   NTclustered gi|2553553343|ref|XM_058481344.1| 688661 g2562 i0 81.853 11.1428571428571 259 43 67 4 54 310 350 94 Lichtheimia ornata ribosomal protein S8.e (O0I10_001247), partial mRNA blastn 4290 215 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
17488922 17488922 PRJNA934332_P_NODE_7734_length_251_cov_0.865169_g7647_i0 PRJNA934332 7734 251 0.865169 2.17157419 Cokeromyces recurvatus 90255 Fungi Fungi 204 5.93e-48   NTclustered gi|2324056765|ref|XM_051526250.1| 90255 g7647 i0 86.243 77.3107569721115 189 24 75 2 59 246 747 934 Cokeromyces recurvatus S-adenosylmethionine synthase (BX663DRAFT_499916), mRNA blastn 19405 204 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;