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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA934332" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA934332 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6359471 6359471 PRJNA934332_P_NODE_7245_length_255_cov_1.494505_g7158_i0 PRJNA934332 7245 255 1.494505 3.81098775 Leishmania 5658 Euglenozoa other_Eukaryota 71.3 6.4e-8   NTclustered gi|2785802850|ref|XM_067206205.1| 2249476 g7158 i0 79.245 5.74901960784314 106 18 41 3 148 251 783 680 Leishmania orientalis uncharacterized protein (LSCM4_04216), partial mRNA blastn 1466 71.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania orientalis
7288722 7288722 PRJNA934332_P_NODE_2726_length_381_cov_1.392857_g2639_i0 PRJNA934332 2726 381 1.392857 5.30678517 Leishmania sp. Ghana 2012 LV757 2803181 Euglenozoa other_Eukaryota 337 8.96e-88   NTclustered gi|2795013001|ref|XM_067840171.1| 2803181 g2639 i0 84.046 62.792650918635204 351 54 92 2 2 351 350 1 Leishmania sp. Ghana 2012 LV757 uncharacterized protein (GH5_00022), partial mRNA blastn 23924 337 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania sp. Ghana 2012 LV757
8563594 8563594 PRJNA934332_P_NODE_6147_length_274_cov_1.706468_g6060_i0 PRJNA934332 6147 274 1.706468 4.67572232 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 193 1.4200000000000001e-44   NTclustered gi|1002441404|ref|XM_015806059.1| 157538 g6060 i0 86.705 27.4963503649635 173 23 63 0 33 205 260 88 Leptomonas pyrrhocoris putative mitochondrial 40s ribosomal protein S15a mRNA blastn 7534 193 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
11114232 11114232 PRJNA934332_P_NODE_1889_length_443_cov_4.348649_g1802_i0 PRJNA934332 1889 443 4.348649 19.26451507 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 619 9.369999999999998e-173   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g1802 i0 91.796 143.38374717833 451 28 100 7 1 443 4802 4353 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 63519 619 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
11114233 11114233 PRJNA934332_P_NODE_189_length_1281_cov_3.331126_g151_i0 PRJNA934332 189 1281 3.331126 42.67172406 Neobodo designis 312471 Euglenozoa other_Eukaryota 1910 0   NTclustered gi|197723537|gb|EF681922.2| 312471 g151 i0 94.614 133.472287275566 1244 49 96 13 46 1281 1 1234 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 170978 1910 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
11459182 11459182 PRJNA934332_P_NODE_1649_length_474_cov_5.725686_g1562_i0 PRJNA934332 1649 474 5.725686 27.13975164 Leishmania 5658 Euglenozoa other_Eukaryota 464 4.999999999999999e-126   NTclustered gi|2593250474|emb|OY748421.1| 5660 g1562 i0 84.462 114.907172995781 502 45 100 22 1 474 990550 991046 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 54466 464 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
11459186 11459186 PRJNA934332_P_NODE_3569_length_342_cov_0.832714_g3482_i0 PRJNA934332 3569 342 0.832714 2.84788188 Leishmania 5658 Euglenozoa other_Eukaryota 335 2.869999999999999e-87   NTclustered gi|2794759891|ref|XM_067836755.1| 5663 g3482 i0 85.538 42.6432748538012 325 41 94 4 1 322 322 1 Leishmania enriettii uncharacterized protein (CUR178_05060), partial mRNA blastn 14584 335 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania enriettii
13664192 13664192 PRJNA934332_P_NODE_2311_length_408_cov_1.379104_g2224_i0 PRJNA934332 2311 408 1.379104 5.62674432 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 412 1.5599999999999998e-110   NTclustered gi|226347408|gb|FJ807243.1| 56466 g2224 i0 85.149 91.7107843137255 404 58 99 2 6 408 512 110 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 37418 412 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
22587612 22587612 PRJNA934332_P_NODE_6198_length_274_cov_0.910448_g6111_i0 PRJNA934332 6198 274 0.910448 2.49462752 Trypanosoma vivax 5699 Euglenozoa other_Eukaryota 296 1.05e-75   NTclustered gi|340052522|emb|HE573019.1| 1055687 g6111 i0 86.182 7.30656934306569 275 36 100 2 1 274 1084587 1084314 Trypanosoma vivax Y486 annotated genomic contig, chromosome 3 blastn 2002 296 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax
25136776 25136776 PRJNA934332_P_NODE_4340_length_316_cov_1.246914_g4253_i0 PRJNA934332 4340 316 1.246914 3.94024824 Euglena gracilis 3039 Euglenozoa other_Eukaryota 193 1.67e-44   NTclustered gi|33694247|gb|AY288511.1| 3039 g4253 i0 81.818 61.7183544303797 231 40 73 2 1 230 230 1 Euglena gracilis heat shock protein 90 mRNA, partial cds blastn 19503 193 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;