RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA934332" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA934332 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8563584 8563584 PRJNA934332_P_NODE_5267_length_290_cov_1.161290_g5180_i0 PRJNA934332 5267 290 1.16129 3.367741 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 405 1.79e-108   NTclustered gi|197723521|gb|EF681900.2| 458884 g5180 i0 99.111 100.458620689655 225 2 78 0 66 290 1 225 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 29133 405 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
8563600 8563600 PRJNA934332_P_NODE_6647_length_266_cov_1.409326_g6560_i0 PRJNA934332 6647 266 1.409326 3.74880716 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 309 1.31e-79   NTclustered gi|224549833|gb|FJ456915.1| 39717 g6560 i0 87.732 93.8195488721804 269 27 100 5 1 266 776 511 Paulinella chromatophora strain FK01 actin gene, partial cds blastn 24956 309 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;