contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA934332" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2186010 | 2186010 | PRJNA934332_P_NODE_9242_length_246_cov_1.780347_g9155_i0 | PRJNA934332 | 9242 | 246 | 1.780347 | 4.37965362 | Fastidiosipila sanguinis | 236753 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|1359121252|gb|CP027226.1| | 236753 | g9155 | i0 | 100 | 1 | 246 | 0 | 100 | 0 | 1 | 246 | 1564237 | 1564482 | Fastidiosipila sanguinis strain CCUG 47711 chromosome, complete genome | blastn | 246 | 455 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Fastidiosipila | Fastidiosipila sanguinis | ||
| 2531095 | 2531095 | PRJNA934332_P_NODE_3922_length_330_cov_1.089494_g3835_i0 | PRJNA934332 | 3922 | 330 | 1.089494 | 3.5953302 | Bacillati | 1783272 | Bacteria | Bacteria | 610 | 4.09e-170 | NTclustered | gi|1848626851|gb|CP054017.1| | 1292 | g3835 | i0 | 100 | 433.057575757576 | 330 | 0 | 100 | 0 | 1 | 330 | 1219158 | 1219487 | Staphylococcus warneri strain FDAARGOS_754 chromosome, complete genome | blastn | 142909 | 610 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 3461465 | 3461465 | PRJNA934332_P_NODE_10363_length_243_cov_1.358824_g10276_i0 | PRJNA934332 | 10363 | 243 | 1.358824 | 3.30194232 | Christensenellaceae bacterium | 2054177 | Bacteria | Bacteria | 182 | 2.68e-41 | NTclustered | gi|2621705955|emb|OY764017.1| | 2054177 | g10276 | i0 | 81.223 | 81.9382716049383 | 229 | 39 | 93 | 4 | 1 | 227 | 46896 | 46670 | MAG: Christensenellaceae bacterium isolate da863df8-3121-48c8-a9fd-195775925dd7 genome assembly, chromosome: 1 | blastn | 19911 | 182 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Christensenellales | Christensenellaceae | Christensenellaceae bacterium | |||
| 3807462 | 3807462 | PRJNA934332_P_NODE_6463_length_269_cov_1.571429_g6376_i0 | PRJNA934332 | 6463 | 269 | 1.571429 | 4.22714401 | Enterococcus | 1350 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|2437787960|gb|CP116571.1| | 1351 | g6376 | i0 | 100 | 100 | 269 | 0 | 100 | 0 | 1 | 269 | 2044434 | 2044702 | Enterococcus faecalis strain K190-1 chromosome, complete genome | blastn | 26900 | 497 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 3807466 | 3807466 | PRJNA934332_P_NODE_7423_length_252_cov_0.860335_g7336_i0 | PRJNA934332 | 7423 | 252 | 0.860335 | 2.1680442 | Bacillaceae | 186817 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|1839114216|gb|MT437014.1| | 1409 | g7336 | i0 | 100 | 144.035714285714 | 252 | 0 | 100 | 0 | 1 | 252 | 281 | 30 | Bacillus sp. (in: Bacteria) strain P12-35 16S ribosomal RNA gene, partial sequence | blastn | 36297 | 466 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. (in: firmicutes) | ||
| 5083752 | 5083752 | PRJNA934332_P_NODE_4164_length_321_cov_2.016129_g4077_i0 | PRJNA934332 | 4164 | 321 | 2.016129 | 6.47177409 | Bacillales | 1385 | Bacteria | Bacteria | 593 | 3.9899999999999986e-165 | NTclustered | gi|2556673542|gb|OR367734.1| | 1282 | g4077 | i0 | 100 | 109.990654205607 | 321 | 0 | 100 | 0 | 1 | 321 | 116 | 436 | Staphylococcus epidermidis strain A3 16S ribosomal RNA gene, partial sequence | blastn | 35307 | 593 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 6359457 | 6359457 | PRJNA934332_P_NODE_2645_length_385_cov_1.365385_g2558_i0 | PRJNA934332 | 2645 | 385 | 1.365385 | 5.25673225 | Streptococcus | 1301 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|1943211519|gb|CP065707.1| | 1303 | g2558 | i0 | 99.74 | 345.005194805195 | 385 | 1 | 100 | 0 | 1 | 385 | 424406 | 424022 | Streptococcus oralis strain FDAARGOS_885 chromosome, complete genome | blastn | 132827 | 712 | 0.991573033707865 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 6359473 | 6359473 | PRJNA934332_P_NODE_7565_length_251_cov_0.865169_g7478_i0 | PRJNA934332 | 7565 | 251 | 0.865169 | 2.17157419 | Anoxybacillus | 150247 | Bacteria | Bacteria | 453 | 5.34e-123 | NTclustered | gi|1207877705|gb|CP021838.1| | 33934 | g7478 | i0 | 99.203 | 2.99601593625498 | 251 | 2 | 100 | 0 | 1 | 251 | 1880634 | 1880384 | Anoxybacillus flavithermus strain 52-1A chromosome, complete genome | blastn | 752 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Anoxybacillus | Anoxybacillus flavithermus | ||
| 6359479 | 6359479 | PRJNA934332_P_NODE_9925_length_245_cov_0.895349_g9838_i0 | PRJNA934332 | 9925 | 245 | 0.895349 | 2.19360505 | Staphylococcus | 1279 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g9838 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 2376309 | 2376065 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 24500 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 8563587 | 8563587 | PRJNA934332_P_NODE_5767_length_281_cov_1.384615_g5680_i0 | PRJNA934332 | 5767 | 281 | 1.384615 | 3.89076815 | Faecalibacterium prausnitzii | 853 | Bacteria | Bacteria | 520 | 5.909999999999999e-143 | NTclustered | gi|2446175570|gb|CP117963.1| | 853 | g5680 | i0 | 100 | 19.3024911032028 | 281 | 0 | 100 | 0 | 1 | 281 | 2604072 | 2604352 | Faecalibacterium prausnitzii strain AP34BHI chromosome, complete genome | blastn | 5424 | 520 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Faecalibacterium | Faecalibacterium prausnitzii | ||
| 8908221 | 8908221 | PRJNA934332_P_NODE_6967_length_260_cov_1.454545_g6880_i0 | PRJNA934332 | 6967 | 260 | 1.454545 | 3.781817 | Carnobacterium | 2747 | Bacteria | Bacteria | 481 | 2.55e-131 | NTclustered | gi|1051011622|gb|CP016844.1| | 2751 | g6880 | i0 | 100 | 5.66923076923077 | 260 | 0 | 100 | 0 | 1 | 260 | 707390 | 707131 | Carnobacterium maltaromaticum strain TMW 2.1581 chromosome, complete genome | blastn | 1474 | 481 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Carnobacterium | Carnobacterium maltaromaticum | ||
| 8908226 | 8908226 | PRJNA934332_P_NODE_7687_length_251_cov_0.865169_g7600_i0 | PRJNA934332 | 7687 | 251 | 0.865169 | 2.17157419 | Carnobacterium | 2747 | Bacteria | Bacteria | 453 | 5.34e-123 | NTclustered | gi|1051011622|gb|CP016844.1| | 2751 | g7600 | i0 | 99.203 | 4 | 251 | 2 | 100 | 0 | 1 | 251 | 2779113 | 2779363 | Carnobacterium maltaromaticum strain TMW 2.1581 chromosome, complete genome | blastn | 1004 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Carnobacterium | Carnobacterium maltaromaticum | ||
| 11459187 | 11459187 | PRJNA934332_P_NODE_3829_length_333_cov_1.776923_g3742_i0 | PRJNA934332 | 3829 | 333 | 1.776923 | 5.91715359 | Paenibacillus | 44249 | Bacteria | Bacteria | 616 | 8.87e-172 | NTclustered | gi|1125819267|gb|CP011420.1| | 1406 | g3742 | i0 | 100 | 1109.4984984985 | 333 | 0 | 100 | 0 | 1 | 333 | 15737 | 15405 | Paenibacillus polymyxa strain ATCC 15970 chromosome, complete genome | blastn | 369463 | 616 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus polymyxa | ||
| 11459195 | 11459195 | PRJNA934332_P_NODE_6269_length_272_cov_2.829146_g6182_i0 | PRJNA934332 | 6269 | 272 | 2.829146 | 7.69527712 | Listeria | 1637 | Bacteria | Bacteria | 503 | 5.729999999999998e-138 | NTclustered | gi|2514039015|gb|CP096154.1| | 1639 | g6182 | i0 | 100 | 101.018382352941 | 272 | 0 | 100 | 0 | 1 | 272 | 1961957 | 1962228 | Listeria monocytogenes strain FSL F2-0695 chromosome, complete genome | blastn | 27477 | 503 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 12734865 | 12734865 | PRJNA934332_P_NODE_9990_length_244_cov_2.432749_g9903_i0 | PRJNA934332 | 9990 | 244 | 2.432749 | 5.93590756 | Paenibacillus | 44249 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1125819267|gb|CP011420.1| | 1406 | g9903 | i0 | 100 | 1115.23360655738 | 244 | 0 | 100 | 0 | 1 | 244 | 14685 | 14928 | Paenibacillus polymyxa strain ATCC 15970 chromosome, complete genome | blastn | 272117 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus polymyxa | ||
| 13664181 | 13664181 | PRJNA934332_P_NODE_11351_length_241_cov_0.916667_g11264_i0 | PRJNA934332 | 11351 | 241 | 0.916667 | 2.20916747 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 438 | 1.4299999999999999e-118 | NTclustered | gi|2709261975|dbj|AP028322.1| | 1282 | g11264 | i0 | 99.585 | 100 | 241 | 0 | 100 | 1 | 1 | 241 | 682114 | 681875 | Staphylococcus epidermidis KSE124-2 DNA, complete genome | blastn | 24100 | 438 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 16557966 | 16557966 | PRJNA934332_P_NODE_9853_length_245_cov_0.895349_g9766_i0 | PRJNA934332 | 9853 | 245 | 0.895349 | 2.19360505 | Staphylococcus | 1279 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|9623890|gb|AF269987.1|AF269987 | 1282 | g9766 | i0 | 99.592 | 100 | 245 | 1 | 100 | 0 | 1 | 245 | 1304 | 1060 | Staphylococcus epidermidis strain SR1 clone step.1038g08 genomic sequence | blastn | 24500 | 448 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 18762330 | 18762330 | PRJNA934332_P_NODE_9055_length_247_cov_0.885057_g8968_i0 | PRJNA934332 | 9055 | 247 | 0.885057 | 2.18609079 | Streptococcus sp. Marseille-Q3533 | 2759692 | Bacteria | Bacteria | 416 | 6.869999999999999e-112 | NTclustered | gi|2237347942|emb|OW724079.1| | 2759692 | g8968 | i0 | 97.154 | 6.95951417004049 | 246 | 7 | 99 | 0 | 1 | 246 | 866902 | 867147 | Streptococcus sp. Marseille-Q3533 genome assembly, chromosome: contig00001 | blastn | 1719 | 416 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. Marseille-Q3533 | ||
| 20381721 | 20381721 | PRJNA934332_P_NODE_10956_length_242_cov_0.911243_g10869_i0 | PRJNA934332 | 10956 | 242 | 0.911243 | 2.20520806 | Staphylococcus | 1279 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1982319721|gb|CP052971.1| | 1282 | g10869 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 200069 | 200310 | Staphylococcus epidermidis strain HD33-1 chromosome, complete genome | blastn | 24200 | 448 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 20381758 | 20381758 | PRJNA934332_P_NODE_9676_length_245_cov_0.895349_g9589_i0 | PRJNA934332 | 9676 | 245 | 0.895349 | 2.19360505 | Staphylococcus | 1279 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2489625674|gb|CP121231.1| | 1282 | g9589 | i0 | 99.592 | 101 | 245 | 1 | 100 | 0 | 1 | 245 | 1765069 | 1765313 | Staphylococcus epidermidis strain 9 chromosome | blastn | 24745 | 448 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 22933243 | 22933243 | PRJNA934332_P_NODE_11018_length_242_cov_0.911243_g10931_i0 | PRJNA934332 | 11018 | 242 | 0.911243 | 2.20520806 | Enterococcus | 1350 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|1963838897|emb|LR962850.1| | 1351 | g10931 | i0 | 99.587 | 100 | 242 | 1 | 100 | 0 | 1 | 242 | 3078397 | 3078638 | Enterococcus faecalis isolate 27688_1#342 genome assembly, chromosome: 1 | blastn | 24200 | 442 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 22933256 | 22933256 | PRJNA934332_P_NODE_6678_length_266_cov_0.797927_g6591_i0 | PRJNA934332 | 6678 | 266 | 0.797927 | 2.12248582 | Bacteria | 2 | Bacteria | Bacteria | 459 | 1.2299999999999998e-124 | NTclustered | gi|1042399388|gb|KU555885.1| | 1292 | g6591 | i0 | 97.744 | 434.018796992481 | 266 | 6 | 100 | 0 | 1 | 266 | 596 | 861 | Staphylococcus warneri strain SWA15219-3 16S-23S ribosomal RNA intergenic spacer gene, region | blastn | 115449 | 459 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 22933267 | 22933267 | PRJNA934332_P_NODE_9258_length_246_cov_1.468208_g9171_i0 | PRJNA934332 | 9258 | 246 | 1.468208 | 3.61179168 | Carnobacterium | 2747 | Bacteria | Bacteria | 305 | 1.54e-78 | NTclustered | gi|1051011622|gb|CP016844.1| | 2751 | g9171 | i0 | 99.405 | 4.41869918699187 | 168 | 1 | 100 | 0 | 79 | 246 | 25582 | 25415 | Carnobacterium maltaromaticum strain TMW 2.1581 chromosome, complete genome | blastn | 1087 | 305 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Carnobacterium | Carnobacterium maltaromaticum | ||
| 23863015 | 23863015 | PRJNA934332_P_NODE_9439_length_246_cov_0.890173_g9352_i0 | PRJNA934332 | 9439 | 246 | 0.890173 | 2.18982558 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2716021442|gb|CP114450.1| | 1282 | g9352 | i0 | 100 | 100 | 246 | 0 | 100 | 0 | 1 | 246 | 235612 | 235367 | Staphylococcus epidermidis strain SE 4.8 chromosome, complete genome | blastn | 24600 | 455 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 25481992 | 25481992 | PRJNA934332_P_NODE_2960_length_369_cov_0.966216_g2873_i0 | PRJNA934332 | 2960 | 369 | 0.966216 | 3.56533704 | Weissella | 46255 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|2788849649|gb|CP166847.1| | 1583 | g2873 | i0 | 99.73 | 613.970189701897 | 370 | 0 | 100 | 1 | 1 | 369 | 20767 | 20398 | Weissella confusa strain HYF86 chromosome HYF86, complete sequence | blastn | 226555 | 676 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella confusa |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;