contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA934332" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 910643 | 910643 | PRJNA934332_P_NODE_6541_length_268_cov_1.282051_g6454_i0 | PRJNA934332 | 6541 | 268 | 1.282051 | 3.43589668 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 78.7 | 4.05e-10 | NTclustered | gi|2225500096|gb|CP095464.1| | 2026799 | g6454 | i0 | 95.833 | 2.27238805970149 | 48 | 2 | 18 | 0 | 134 | 181 | 853476 | 853429 | MAG: Verrucomicrobia bacterium isolate LL51 chromosome, complete genome | blastn | 609 | 78.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 2531084 | 2531084 | PRJNA934332_P_NODE_10542_length_243_cov_0.905882_g10455_i0 | PRJNA934332 | 10542 | 243 | 0.905882 | 2.20129326 | Gemmata | 113 | Bacteria | Bacteria | 394 | 3.16e-105 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g10455 | i0 | 95.885 | 41.59670781893 | 243 | 10 | 100 | 0 | 1 | 243 | 2944283 | 2944525 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 10108 | 394 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 3461499 | 3461499 | PRJNA934332_P_NODE_4723_length_304_cov_1.463203_g4636_i0 | PRJNA934332 | 4723 | 304 | 1.463203 | 4.44813712 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 431 | 3.109999999999999e-116 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g4636 | i0 | 92.384 | 122.190789473684 | 302 | 23 | 99 | 0 | 3 | 304 | 558511 | 558812 | Gemmata sp. SH-PL17, complete genome | blastn | 37146 | 431 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 8563613 | 8563613 | PRJNA934332_P_NODE_7727_length_251_cov_0.865169_g7640_i0 | PRJNA934332 | 7727 | 251 | 0.865169 | 2.17157419 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 248 | 2.7e-61 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g7640 | i0 | 85.654 | 7.27091633466135 | 237 | 32 | 94 | 2 | 3 | 238 | 1360755 | 1360990 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 1825 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 11114217 | 11114217 | PRJNA934332_P_NODE_10589_length_243_cov_0.905882_g10502_i0 | PRJNA934332 | 10589 | 243 | 0.905882 | 2.20129326 | Planctellipticum variicoloris | 3064265 | Bacteria | Bacteria | 255 | 1.5600000000000001e-63 | NTclustered | gi|2557458921|gb|CP130886.1| | 3064265 | g10502 | i0 | 86.192 | 9.39506172839506 | 239 | 29 | 98 | 4 | 1 | 237 | 6622908 | 6623144 | Planctellipticum variicoloris strain SH412 chromosome, complete genome | blastn | 2283 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctellipticum | Planctellipticum variicoloris | |
| 11459181 | 11459181 | PRJNA934332_P_NODE_1589_length_481_cov_1.129902_g1502_i0 | PRJNA934332 | 1589 | 481 | 1.129902 | 5.43482862 | Planctomycetia | 203683 | Bacteria | Bacteria | 758 | 0 | NTclustered | gi|10436091|gb|AF239696.1|AF239696 | 121118 | g1502 | i0 | 95.031 | 119.656964656965 | 483 | 22 | 100 | 2 | 1 | 481 | 761 | 279 | Gemmata-like str. JW11-2f5 16S ribosomal RNA gene, partial sequence | blastn | 57555 | 758 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Gemmata-like str. JW11-2f5 | ||
| 11459203 | 11459203 | PRJNA934332_P_NODE_8629_length_248_cov_0.880000_g8542_i0 | PRJNA934332 | 8629 | 248 | 0.88 | 2.1824 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 425 | 1.15e-114 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g8542 | i0 | 98.347 | 139.29435483871 | 242 | 4 | 98 | 0 | 1 | 242 | 1250375 | 1250616 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 34545 | 425 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 17488924 | 17488924 | PRJNA934332_P_NODE_7854_length_250_cov_0.870056_g7767_i0 | PRJNA934332 | 7854 | 250 | 0.870056 | 2.17514 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 296 | 9.47e-76 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g7767 | i0 | 88.048 | 26.208 | 251 | 28 | 100 | 2 | 1 | 250 | 1315177 | 1315426 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 6552 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18762294 | 18762294 | PRJNA934332_P_NODE_4635_length_307_cov_1.123932_g4548_i0 | PRJNA934332 | 4635 | 307 | 1.123932 | 3.45047124 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 307 | 5.540000000000001e-79 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g4548 | i0 | 85.959 | 254.5667752443 | 292 | 35 | 94 | 5 | 20 | 307 | 320228 | 319939 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 78152 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 18762310 | 18762310 | PRJNA934332_P_NODE_7115_length_257_cov_1.695652_g7028_i0 | PRJNA934332 | 7115 | 257 | 1.695652 | 4.35782564 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 337 | 5.759999999999998e-88 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g7028 | i0 | 90.272 | 9.94163424124514 | 257 | 25 | 100 | 0 | 1 | 257 | 846 | 1102 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 2555 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 20381755 | 20381755 | PRJNA934332_P_NODE_8356_length_249_cov_0.875000_g8269_i0 | PRJNA934332 | 8356 | 249 | 0.875 | 2.17875 | Gemmata | 113 | Bacteria | Bacteria | 174 | 4.61e-39 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g8269 | i0 | 85.714 | 6.42971887550201 | 168 | 21 | 66 | 3 | 1 | 165 | 2867724 | 2867891 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 1601 | 174 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 21657711 | 21657711 | PRJNA934332_P_NODE_657_length_739_cov_1.229730_g579_i0 | PRJNA934332 | 657 | 739 | 1.22973 | 9.0877047 | Schlesneria | 656899 | Bacteria | Bacteria | 824 | 0 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g579 | i0 | 87.243 | 100.109607577808 | 729 | 83 | 98 | 8 | 17 | 739 | 865 | 1589 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 73981 | 828 | 0.995169082125604 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 25482000 | 25482000 | PRJNA934332_P_NODE_6380_length_271_cov_0.813131_g6293_i0 | PRJNA934332 | 6380 | 271 | 0.813131 | 2.20358501 | Gemmata | 113 | Bacteria | Bacteria | 405 | 1.66e-108 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g6293 | i0 | 93.796 | 171.09963099631 | 274 | 10 | 100 | 7 | 1 | 271 | 3634041 | 3634310 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 46368 | 405 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;