RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA931595" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA931595 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9837886 9837886 PRJNA931595_P_NODE_9768_length_274_cov_2.651741_g9659_i0 PRJNA931595 9768 274 2.651741 7.26577034 Thermus sp. NEB1569 2918899 Bacteria Bacteria 501 2.08e-137   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g9659 i0 99.635 5.57299270072993 274 1 100 0 1 274 1580123 1579850 Thermus sp. NEB1569 chromosome, complete genome blastn 1527 501 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569
11113205 11113205 PRJNA931595_P_NODE_12289_length_251_cov_0.865169_g12180_i0 PRJNA931595 12289 251 0.865169 2.17157419 Thermus sp. NEB1569 2918899 Bacteria Bacteria 459 1.1499999999999996e-124   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g12180 i0 99.602 46.6733067729084 251 1 100 0 1 251 1447573 1447323 Thermus sp. NEB1569 chromosome, complete genome blastn 11715 459 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;