RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA931595" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA931595 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13663184 13663184 PRJNA931595_P_NODE_12431_length_251_cov_0.865169_g12322_i0 PRJNA931595 12431 251 0.865169 2.17157419 Allocoleopsis franciscana 2886352 Bacteria Bacteria 257 4.49e-64   NTclustered gi|428249989|gb|CP003630.1| 1173027 g12322 i0 85.425 0.98406374501992 247 36 98 0 1 247 2373390 2373636 Allocoleopsis franciscana PCC 7113, complete genome blastn 247 257 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Coleofasciculales Coleofasciculaceae Allocoleopsis Allocoleopsis franciscana
14937571 14937571 PRJNA931595_P_NODE_15272_length_242_cov_0.911243_g15163_i0 PRJNA931595 15272 242 0.911243 2.20520806 Synechococcus sp. CB0101 232348 Bacteria Bacteria 52.8 0.022   NTclustered gi|1626690261|gb|CP039373.1| 232348 g15163 i0 100 0.115702479338843 28 0 12 0 148 175 1687073 1687046 Synechococcus sp. CB0101 chromosome, complete genome blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. CB0101
19106411 19106411 PRJNA931595_P_NODE_9335_length_278_cov_1.912195_g9226_i0 PRJNA931595 9335 278 1.912195 5.3159021 Oscillatoriales 1150 Bacteria Bacteria 514 2.7199999999999996e-141   NTclustered gi|389547262|gb|JQ402190.1| 1211 g9226 i0 100 100 278 0 100 0 1 278 432 709 Uncultured cyanobacterium clone CNY_02470 16S ribosomal RNA gene, partial sequence blastn 27800 514 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;