RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA930380" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA930380 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20036092 20036092 PRJNA930380_P_NODE_6556_length_289_cov_1.231481_g6503_i0 PRJNA930380 6556 289 1.231481 3.55898009 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 52.8 0.027   NTclustered gi|2729079958|ref|XM_065202401.1| 499914 g6503 i0 100 0.0968858131487889 28 0 10 0 244 271 181 208 PREDICTED: Rhopilema esculentum uncharacterized LOC135686213 (LOC135686213), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
23861775 23861775 PRJNA930380_P_NODE_6399_length_289_cov_3.004630_g6346_i0 PRJNA930380 6399 289 3.00463 8.6833807 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2729079958|ref|XM_065202401.1| 499914 g6346 i0 100 0.685121107266436 30 0 10 0 240 269 179 208 PREDICTED: Rhopilema esculentum uncharacterized LOC135686213 (LOC135686213), mRNA blastn 198 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;