contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJNA930380" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 909447 | 909447 | PRJNA930380_P_NODE_2421_length_404_cov_2.492447_g2368_i0 | PRJNA930380 | 2421 | 404 | 2.492447 | 10.06948588 | Corynebacterium sp. YSMAA1_1_F7 | 3383590 | Bacteria | Bacteria | 741 | 0 | NTclustered | gi|2869833946|gb|CP175789.1| | 3383590 | g2368 | i0 | 99.752 | 367.955445544554 | 404 | 1 | 100 | 0 | 1 | 404 | 794746 | 795149 | Corynebacterium sp. YSMAA1_1_F7 chromosome, complete genome | blastn | 148654 | 741 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. YSMAA1_1_F7 | ||
| 1254903 | 1254903 | PRJNA930380_P_NODE_5321_length_295_cov_1.387387_g5268_i0 | PRJNA930380 | 5321 | 295 | 1.387387 | 4.09279165 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.027 | NTclustered | gi|1959051935|gb|CP058277.1| | 1781 | g5268 | i0 | 100 | 0.684745762711864 | 28 | 0 | 9 | 0 | 96 | 123 | 2224834 | 2224807 | Mycobacterium marinum strain MMA1 chromosome, complete genome | blastn | 202 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium marinum | ||
| 5083224 | 5083224 | PRJNA930380_P_NODE_4964_length_299_cov_1.075221_g4911_i0 | PRJNA930380 | 4964 | 299 | 1.075221 | 3.21491079 | Corynebacterium | 1716 | Bacteria | Bacteria | 547 | 2.9099999999999987e-151 | NTclustered | gi|1986087704|gb|CP069533.1| | 38301 | g4911 | i0 | 99.666 | 398.979933110368 | 299 | 1 | 100 | 0 | 1 | 299 | 101971 | 101673 | Corynebacterium minutissimum strain FDAARGOS_1196 chromosome, complete genome | blastn | 119295 | 547 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium minutissimum | ||
| 6358946 | 6358946 | PRJNA930380_P_NODE_3145_length_360_cov_1.421603_g3092_i0 | PRJNA930380 | 3145 | 360 | 1.421603 | 5.1177708 | Microbacterium | 33882 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|1154509326|gb|CP019892.1| | 104336 | g3092 | i0 | 100 | 154.602777777778 | 358 | 0 | 99 | 0 | 3 | 360 | 2458189 | 2458546 | Microbacterium foliorum strain 122 chromosome | blastn | 55657 | 662 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium foliorum | ||
| 7287405 | 7287405 | PRJNA930380_P_NODE_12526_length_247_cov_1.327586_g12473_i0 | PRJNA930380 | 12526 | 247 | 1.327586 | 3.27913742 | Corynebacterium lizhenjunii | 2709394 | Bacteria | Bacteria | 134 | 7.750000000000001e-27 | NTclustered | gi|1939561086|gb|CP064954.1| | 2709394 | g12473 | i0 | 77.308 | 181.635627530364 | 260 | 38 | 100 | 19 | 1 | 247 | 708653 | 708402 | Corynebacterium lizhenjunii strain ZJ-599 chromosome, complete genome | blastn | 44864 | 134 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium lizhenjunii | ||
| 8562263 | 8562263 | PRJNA930380_P_NODE_13567_length_244_cov_0.900585_g13514_i0 | PRJNA930380 | 13567 | 244 | 0.900585 | 2.1974274 | Corynebacterium tuberculostearicum | 38304 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2869804070|gb|CP175770.1| | 38304 | g13514 | i0 | 100 | 61.3401639344262 | 244 | 0 | 100 | 0 | 1 | 244 | 1891934 | 1891691 | Corynebacterium tuberculostearicum strain YSMAA5_1_B12 chromosome, complete genome | blastn | 14967 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 8562300 | 8562300 | PRJNA930380_P_NODE_1907_length_448_cov_1.642667_g1854_i0 | PRJNA930380 | 1907 | 448 | 1.642667 | 7.35914816 | Corynebacterium sp. YSMAA1_1_F7 | 3383590 | Bacteria | Bacteria | 798 | 0 | NTclustered | gi|2869833946|gb|CP175789.1| | 3383590 | g1854 | i0 | 98.884 | 414.133928571429 | 448 | 4 | 100 | 1 | 1 | 448 | 795875 | 796321 | Corynebacterium sp. YSMAA1_1_F7 chromosome, complete genome | blastn | 185532 | 798 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. YSMAA1_1_F7 | ||
| 8562414 | 8562414 | PRJNA930380_P_NODE_9727_length_273_cov_1.075000_g9674_i0 | PRJNA930380 | 9727 | 273 | 1.075 | 2.93475 | Rhodococcus erythropolis | 1833 | Bacteria | Bacteria | 483 | 7.5e-132 | NTclustered | gi|2179868499|gb|CP032403.1| | 1833 | g9674 | i0 | 98.535 | 48.8791208791209 | 273 | 4 | 100 | 0 | 1 | 273 | 2409314 | 2409586 | Rhodococcus erythropolis strain D310-1 chromosome, complete genome | blastn | 13344 | 483 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus erythropolis | ||
| 8907711 | 8907711 | PRJNA930380_P_NODE_5347_length_295_cov_1.040541_g5294_i0 | PRJNA930380 | 5347 | 295 | 1.040541 | 3.06959595 | Micropruina | 116071 | Bacteria | Bacteria | 477 | 3.809999999999998e-130 | NTclustered | gi|1345633730|emb|LT985188.1| | 75385 | g5294 | i0 | 95.918 | 221.766101694915 | 294 | 12 | 99 | 0 | 2 | 295 | 1730393 | 1730100 | Micropruina glycogenica isolate 1 genome assembly, chromosome: 1 | blastn | 65421 | 477 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Micropruina | Micropruina glycogenica | ||
| 9837461 | 9837461 | PRJNA930380_P_NODE_9288_length_275_cov_2.133663_g9235_i0 | PRJNA930380 | 9288 | 275 | 2.133663 | 5.86757325 | Corynebacterium tuberculostearicum | 38304 | Bacteria | Bacteria | 508 | 1.2499999999999999e-139 | NTclustered | gi|2869804070|gb|CP175770.1| | 38304 | g9235 | i0 | 100 | 370.898181818182 | 275 | 0 | 100 | 0 | 1 | 275 | 621936 | 622210 | Corynebacterium tuberculostearicum strain YSMAA5_1_B12 chromosome, complete genome | blastn | 101997 | 508 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 10183568 | 10183568 | PRJNA930380_P_NODE_13428_length_244_cov_0.900585_g13375_i0 | PRJNA930380 | 13428 | 244 | 0.900585 | 2.1974274 | Cutibacterium | 1912216 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g13375 | i0 | 100 | 59.8196721311475 | 244 | 0 | 100 | 0 | 1 | 244 | 1812577 | 1812820 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 14596 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11458604 | 11458604 | PRJNA930380_P_NODE_10829_length_261_cov_0.984043_g10776_i0 | PRJNA930380 | 10829 | 261 | 0.984043 | 2.56835223 | Corynebacterium | 1716 | Bacteria | Bacteria | 466 | 7.17e-127 | NTclustered | gi|2537331151|gb|CP047655.1| | 2026255 | g10776 | i0 | 98.851 | 346.988505747126 | 261 | 3 | 100 | 0 | 1 | 261 | 1271922 | 1272182 | Corynebacterium hadale strain DSM 105365 chromosome, complete genome | blastn | 90564 | 466 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium hadale | ||
| 11458648 | 11458648 | PRJNA930380_P_NODE_409_length_915_cov_2.047506_g366_i0 | PRJNA930380 | 409 | 915 | 2.047506 | 18.7346799 | Corynebacterium | 1716 | Bacteria | Bacteria | 987 | 0 | NTclustered | gi|2242616707|gb|CP046605.1| | 38284 | g366 | i0 | 99.269 | 317.303825136612 | 547 | 3 | 94 | 1 | 370 | 915 | 748073 | 748619 | Corynebacterium accolens strain DSM 44278 chromosome, complete genome | blastn | 290333 | 992 | 0.994959677419355 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 12388653 | 12388653 | PRJNA930380_P_NODE_9690_length_273_cov_1.330000_g9637_i0 | PRJNA930380 | 9690 | 273 | 1.33 | 3.6309 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 505 | 1.6e-138 | NTclustered | gi|2493038017|gb|CP114010.1| | 1747 | g9637 | i0 | 100 | 59.3479853479854 | 273 | 0 | 100 | 0 | 1 | 273 | 1862342 | 1862070 | Cutibacterium acnes strain CBS-BPNBT19329 chromosome, complete genome | blastn | 16202 | 505 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12734279 | 12734279 | PRJNA930380_P_NODE_10510_length_266_cov_0.911917_g10457_i0 | PRJNA930380 | 10510 | 266 | 0.911917 | 2.42569922 | Cutibacterium | 1912216 | Bacteria | Bacteria | 481 | 2.62e-131 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g10457 | i0 | 99.248 | 267.101503759398 | 266 | 2 | 100 | 0 | 1 | 266 | 56196 | 56461 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 71049 | 481 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12734349 | 12734349 | PRJNA930380_P_NODE_810_length_660_cov_3.250426_g758_i0 | PRJNA930380 | 810 | 660 | 3.250426 | 21.4528116 | Corynebacterium | 1716 | Bacteria | Bacteria | 1050 | 0 | NTclustered | gi|2869799666|gb|CP175764.1| | 38304 | g758 | i0 | 95.732 | 362.327272727273 | 656 | 20 | 99 | 5 | 1 | 655 | 378794 | 378146 | Corynebacterium tuberculostearicum strain YSMAA5_1_G11 chromosome, complete genome | blastn | 239136 | 1050 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 20381206 | 20381206 | PRJNA930380_P_NODE_13076_length_245_cov_2.761628_g13023_i0 | PRJNA930380 | 13076 | 245 | 2.761628 | 6.7659886 | Microbacterium | 33882 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1154509326|gb|CP019892.1| | 104336 | g13023 | i0 | 100 | 166.877551020408 | 245 | 0 | 100 | 0 | 1 | 245 | 2456502 | 2456746 | Microbacterium foliorum strain 122 chromosome | blastn | 40885 | 453 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium foliorum | ||
| 21657134 | 21657134 | PRJNA930380_P_NODE_10977_length_258_cov_1.054054_g10924_i0 | PRJNA930380 | 10977 | 258 | 1.054054 | 2.71945932 | Brachybacterium | 43668 | Bacteria | Bacteria | 202 | 2.1999999999999997e-47 | NTclustered | gi|2708453573|gb|CP149573.1| | 3023517 | g10924 | i0 | 96.721 | 4.5 | 122 | 3 | 47 | 1 | 1 | 121 | 3641696 | 3641575 | Brachybacterium sp. GPGPB12 chromosome, complete genome | blastn | 1161 | 202 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Brachybacterium sp. GPGPB12 | ||
| 21657184 | 21657184 | PRJNA930380_P_NODE_3537_length_343_cov_2.133333_g3484_i0 | PRJNA930380 | 3537 | 343 | 2.133333 | 7.31733219 | Microbacterium | 33882 | Bacteria | Bacteria | 628 | 1.1799999999999997e-175 | NTclustered | gi|2274432258|gb|CP101471.1| | 33918 | g3484 | i0 | 99.708 | 186.099125364432 | 343 | 1 | 100 | 0 | 1 | 343 | 229781 | 230123 | Microbacterium maritypicum strain DND4 chromosome, complete genome | blastn | 63832 | 634 | 0.990536277602524 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium maritypicum | ||
| 21657195 | 21657195 | PRJNA930380_P_NODE_4757_length_302_cov_1.419214_g4704_i0 | PRJNA930380 | 4757 | 302 | 1.419214 | 4.28602628 | Cutibacterium | 1912216 | Bacteria | Bacteria | 547 | 2.9399999999999987e-151 | NTclustered | gi|1976468523|gb|CP069240.1| | 33010 | g4704 | i0 | 99.338 | 293.698675496689 | 302 | 2 | 100 | 0 | 1 | 302 | 558511 | 558812 | Cutibacterium avidum strain KCTC 5339 chromosome, complete genome | blastn | 88697 | 547 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium avidum | ||
| 22932729 | 22932729 | PRJNA930380_P_NODE_13998_length_242_cov_0.911243_g13945_i0 | PRJNA930380 | 13998 | 242 | 0.911243 | 2.20520806 | Cutibacterium | 1912216 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g13945 | i0 | 100 | 66.9214876033058 | 242 | 0 | 100 | 0 | 1 | 242 | 108656 | 108897 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 16195 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;