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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA929952" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929952 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2184518 2184518 PRJNA929952_P_NODE_23582_length_162_cov_2.150376_g22288_i0 PRJNA929952 23582 162 2.150376 3.48360912 Lecane bulla AEG9 1225256 Rotifera other_Eukaryota 122 1.0099999999999999e-23   NTclustered gi|320564723|gb|HQ944348.1| 1225256 g22288 i0 85.965 42.3888888888889 114 16 70 0 42 155 502 389 Lecane bulla AEG9 voucher CTM0061 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial blastn 6867 122 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla AEG9
2184546 2184546 PRJNA929952_P_NODE_9882_length_369_cov_88.852941_g8601_i0 PRJNA929952 9882 369 88.852941 327.86735229 Lecane bulla 96446 Rotifera other_Eukaryota 355 2.39e-93   NTclustered gi|83285189|gb|DQ297736.1| 96446 g8601 i0 100 27.7777777777778 192 0 77 0 178 369 1 192 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 10250 355 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
2530473 2530473 PRJNA929952_P_NODE_22622_length_172_cov_23.594406_g21328_i0 PRJNA929952 22622 172 23.594406 40.58237832 Ploima 84394 Rotifera other_Eukaryota 318 1.2899999999999999e-82   NTclustered gi|2317705897|gb|OP653727.1| 96446 g21328 i0 100 99.9941860465116 172 0 100 0 1 172 1372 1543 Lecane bulla voucher P11 small subunit ribosomal RNA gene, partial sequence blastn 17199 318 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
4737502 4737502 PRJNA929952_P_NODE_13384_length_292_cov_2.517110_g12091_i0 PRJNA929952 13384 292 2.51711 7.3499612 Adineta vaga complex sp. B JFF-2016 1813165 Rotifera other_Eukaryota 516 7.979999999999999e-142   NTclustered gi|1005055631|gb|KU860774.1| 1813165 g12091 i0 98.63 26.4041095890411 292 3 99 1 1 291 1442 1733 Adineta vaga complex sp. B JFF-2016 isolate H158a 28S ribosomal RNA gene, partial sequence blastn 7710 516 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. B JFF-2016
5083123 5083123 PRJNA929952_P_NODE_6804_length_470_cov_2.349206_g5627_i0 PRJNA929952 6804 470 2.349206 11.0412682 Brachionus 10194 Rotifera other_Eukaryota 152 4.38e-32   NTclustered gi|260909209|gb|GQ894740.1| 183141 g5627 i0 83.133 27.9425531914894 166 28 35 0 113 278 1328 1163 Brachionus ibericus cytochrome oxidase subunit I (COI) gene, complete cds; mitochondrial blastn 13133 152 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus ibericus
7287258 7287258 PRJNA929952_P_NODE_23666_length_161_cov_2.583333_g22372_i0 PRJNA929952 23666 161 2.583333 4.15916613 Brachionus plicatilis 10195 Rotifera other_Eukaryota 187 3.5099999999999993e-43   NTclustered gi|924266819|gb|KP993543.1| 10195 g22372 i0 87.578 84.2484472049689 161 20 100 0 1 161 2010 2170 Brachionus plicatilis beta-actin gene, complete cds blastn 13564 187 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
7632943 7632943 PRJNA929952_P_NODE_3226_length_689_cov_10.707576_g2424_i0 PRJNA929952 3226 689 10.707576 73.77519864 Brachionus 10194 Rotifera other_Eukaryota 113 3.11e-20   NTclustered gi|950655830|gb|KT151641.1| 183142 g2424 i0 75.836 3.99854862119013 269 40 37 23 270 527 293 547 Brachionus quadridentatus 12S ribosomal RNA gene, partial sequence; mitochondrial blastn 2755 113 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus quadridentatus
8562096 8562096 PRJNA929952_P_NODE_20787_length_197_cov_15.160714_g19493_i0 PRJNA929952 20787 197 15.160714 29.86660658 Lecane bulla 96446 Rotifera other_Eukaryota 359 8.98e-95   NTclustered gi|61200802|gb|AY829083.1| 96446 g19493 i0 100 18.0304568527919 194 0 98 0 1 194 1814 2007 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 3552 359 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
8562106 8562106 PRJNA929952_P_NODE_267_length_1702_cov_3.465631_g181_i0 PRJNA929952 267 1702 3.465631 58.98503962 Brachionus plicatilis 10195 Rotifera other_Eukaryota 1086 0   NTclustered gi|254587481|dbj|AB513493.1| 10195 g181 i0 80.742 70.5616921269095 1402 242 81 20 221 1605 1460 70 Brachionus plicatilis tef1a mRNA for translation elongation factor 1 alpha, complete cds blastn 120096 1086 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
9837158 9837158 PRJNA929952_P_NODE_23528_length_163_cov_1.134328_g22234_i0 PRJNA929952 23528 163 1.134328 1.84895464 Eosphora ehrenbergi 104793 Rotifera other_Eukaryota 130 6.1e-26   NTclustered gi|6018205|gb|AF143858.1|AF143858 104793 g22234 i0 81.366 30.478527607362 161 28 98 2 4 163 272 113 Eosphora ehrenbergi 82 kD heat shock protein (hsp82) gene, partial cds blastn 4968 130 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Eosphora Eosphora ehrenbergi
11112815 11112815 PRJNA929952_P_NODE_7269_length_451_cov_259.936019_g6066_i0 PRJNA929952 7269 451 259.936019 1172.31144569 Lepadella patella 231622 Rotifera other_Eukaryota 645 1.5799999999999996e-180   NTclustered gi|83285192|gb|DQ297739.1| 231622 g6066 i0 92.494 76.1286031042129 453 31 100 3 1 451 287 738 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 34334 645 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
12388350 12388350 PRJNA929952_P_NODE_9310_length_386_cov_2.812325_g8036_i0 PRJNA929952 9310 386 2.812325 10.8555745 Lecane bulla 96446 Rotifera other_Eukaryota 477 5.129999999999998e-130   NTclustered gi|167842611|gb|EU188928.1| 96446 g8036 i0 90.489 90.3212435233161 368 24 95 2 1 367 372 15 Lecane bulla isolate Cattail D cytochrome oxidase subunit I-like (cox1) gene, partial sequence; mitochondrial blastn 34864 477 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
16212086 16212086 PRJNA929952_P_NODE_13173_length_296_cov_1.973783_g11880_i0 PRJNA929952 13173 296 1.973783 5.84239768 Adineta vaga 104782 Rotifera other_Eukaryota 481 2.96e-131   NTclustered gi|259129963|gb|GQ398061.1| 104782 g11880 i0 95.946 4.63851351351351 296 12 100 0 1 296 10354 10059 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1373 481 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16212088 16212088 PRJNA929952_P_NODE_13293_length_294_cov_2.015094_g12000_i0 PRJNA929952 13293 294 2.015094 5.92437636 Synchaeta pectinata 525906 Rotifera other_Eukaryota 351 2.4e-92   NTclustered gi|403492659|gb|JX193068.1| 525906 g12000 i0 87.931 101.62925170068 290 35 99 0 1 290 538 827 Synchaeta pectinata isolate A458.2 alpha tubulin gene, partial cds blastn 29879 351 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Synchaetidae Synchaeta Synchaeta pectinata
16212120 16212120 PRJNA929952_P_NODE_7133_length_457_cov_9.563084_g5936_i0 PRJNA929952 7133 457 9.563084 43.70329388 Lepadella patella 231622 Rotifera other_Eukaryota 226 2.4699999999999993e-54   NTclustered gi|166014123|gb|EU252112.1| 497825 g5936 i0 81.605 22.7199124726477 299 29 63 18 168 457 464 183 Lepadella patella oblonga internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 10383 226 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
16212123 16212123 PRJNA929952_P_NODE_8453_length_410_cov_723.236220_g7194_i0 PRJNA929952 8453 410 723.23622 2965.268502 Lecane bulla 96446 Rotifera other_Eukaryota 680 0   NTclustered gi|61200802|gb|AY829083.1| 96446 g7194 i0 96.585 63.3756097560976 410 14 100 0 1 410 447 38 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 25984 680 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
16212127 16212127 PRJNA929952_P_NODE_9773_length_372_cov_227.364431_g8495_i0 PRJNA929952 9773 372 227.364431 845.79568332 Lecane bulla 96446 Rotifera other_Eukaryota 652 0   NTclustered gi|61200802|gb|AY829083.1| 96446 g8495 i0 98.387 86.1424731182796 372 5 100 1 1 372 1358 1728 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 32045 652 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
17487411 17487411 PRJNA929952_P_NODE_13714_length_286_cov_3.058366_g12421_i0 PRJNA929952 13714 286 3.058366 8.74692676 Proales similis 360698 Rotifera other_Eukaryota 309 1.4200000000000002e-79   NTclustered gi|1859640894|gb|MN970216.1| 360698 g12421 i0 89.2 56.7622377622378 250 23 87 3 35 282 12235 12482 Proales similis mitochondrion, complete genome blastn 16234 309 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
17487413 17487413 PRJNA929952_P_NODE_14534_length_273_cov_23.413934_g13240_i0 PRJNA929952 14534 273 23.413934 63.92003982 Lecane bulla 96446 Rotifera other_Eukaryota 503 5.76e-138   NTclustered gi|83285086|gb|DQ297698.1| 96446 g13240 i0 100 99.6410256410256 272 0 99 0 1 272 893 622 Lecane bulla 18S ribosomal RNA gene, partial sequence blastn 27202 503 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
18760786 18760786 PRJNA929952_P_NODE_2775_length_733_cov_18.876420_g2057_i0 PRJNA929952 2775 733 18.87642 138.3641586 Brachionus angularis 396692 Rotifera other_Eukaryota 346 3.01e-90   NTclustered gi|1999716433|gb|MT875425.1| 396692 g2057 i0 81.839 13.3519781718963 435 57 58 19 307 732 6205 6626 Brachionus angularis chromosome I mitochondrion, complete sequence blastn 9787 346 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
22586139 22586139 PRJNA929952_P_NODE_20058_length_209_cov_14.650000_g18764_i0 PRJNA929952 20058 209 14.65 30.6185 Lecane bulla 96446 Rotifera other_Eukaryota 385 1.59e-102   NTclustered gi|61200802|gb|AY829083.1| 96446 g18764 i0 100 101.205741626794 208 0 99 0 1 208 2305 2512 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 21152 385 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
22932627 22932627 PRJNA929952_P_NODE_19818_length_213_cov_18.755435_g18524_i0 PRJNA929952 19818 213 18.755435 39.94907655 Lecane 96445 Rotifera other_Eukaryota 394 2.7e-105   NTclustered gi|83285086|gb|DQ297698.1| 96446 g18524 i0 100 100.272300469484 213 0 100 0 1 213 355 143 Lecane bulla 18S ribosomal RNA gene, partial sequence blastn 21358 394 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;