RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA929952" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA929952 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6012392 6012392 PRJNA929952_P_NODE_11925_length_320_cov_3.353952_g10632_i0 PRJNA929952 11925 320 3.353952 10.7326464 Ripothoz virus 3131336 Viruses Viruses 62.1 4.99e-5   NTclustered gi|2717322249|gb|PP173638.1| 3131336 g10632 i0 97.222 0.1125 36 1 11 0 80 115 5236 5201 MAG: Ripothoz virus isolate MP3_k141_314104 genomic sequence blastn 36 62.1 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripothoz virus
12388309 12388309 PRJNA929952_P_NODE_18550_length_229_cov_3.755000_g17256_i0 PRJNA929952 18550 229 3.755 8.59895 Chrocurosk virus 3129322 Viruses Viruses 233 6.799999999999999e-57   NTclustered gi|2717317280|gb|PP171770.1| 3129322 g17256 i0 85.398 241.344978165939 226 31 98 2 5 229 1662 1886 MAG: Chrocurosk virus isolate CC1A_k141_129357 genomic sequence blastn 55268 233 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Chrocurosk virus
16212109 16212109 PRJNA929952_P_NODE_21013_length_194_cov_2.793939_g19719_i0 PRJNA929952 21013 194 2.793939 5.42024166 Ripothoz virus 3131336 Viruses Viruses 202 1.5699999999999998e-47   NTclustered gi|2717322249|gb|PP173638.1| 3131336 g19719 i0 85.787 2.56701030927835 197 21 100 6 1 194 5631 5439 MAG: Ripothoz virus isolate MP3_k141_314104 genomic sequence blastn 498 202 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripothoz virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;