RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA929952" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA929952 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13662810 13662810 PRJNA929952_P_NODE_5511_length_530_cov_9.151697_g4433_i0 PRJNA929952 5511 530 9.151697 48.5039941 Candidatus Dependentiae bacterium Noda2021 2891165 Bacteria Bacteria 481 5.599999999999998e-131   NTclustered gi|2131577866|dbj|AP025250.1| 2891165 g4433 i0 83.491 23.9547169811321 527 75 98 11 7 528 216169 216688 Candidatus Dependentiae bacterium Noda2021 DNA, complete genome blastn 12696 481 1 Bacteria Bacteria candidate phyla             Candidatus Dependentiae bacterium Noda2021
17487457 17487457 PRJNA929952_P_NODE_9714_length_374_cov_70.365217_g8436_i0 PRJNA929952 9714 374 70.365217 263.16591158 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 390 6.64e-104   NTclustered gi|2874253778|emb|OY969762.1| 2052149 g8436 i0 85.488 112.590909090909 379 50 100 4 1 374 2993477 2993099 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.c.1 genome assembly, chromosome: 1 blastn 42109 390 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;