RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA929940" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929940 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20035725 20035725 PRJNA929940_S_NODE_20956_length_225_cov_1.845745_g20721_i0 PRJNA929940 20956 225 1.845745 4.15292625 Polaribacter sp. SA4-10 754397 Bacteria Bacteria 187 5.26e-43   NTclustered gi|1199775334|gb|CP019331.1| 754397 g20721 i0 82.938 42.2888888888889 211 32 93 4 2 210 1035451 1035659 Polaribacter sp. SA4-10 genome blastn 9515 187 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Polaribacter Polaribacter sp. SA4-10
20035738 20035738 PRJNA929940_S_NODE_47756_length_163_cov_2.150794_g47521_i0 PRJNA929940 47756 163 2.150794 3.50579422 Lutibacter sp. A64 2918526 Bacteria Bacteria 121 3.669999999999999e-23   NTclustered gi|2201049089|gb|CP092487.1| 2918526 g47521 i0 83.206 2.02453987730061 131 22 80 0 13 143 805178 805308 Lutibacter sp. A64 chromosome, complete genome blastn 330 121 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Lutibacter Lutibacter sp. A64

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;