RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA929940" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929940 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10183461 10183461 PRJNA929940_S_NODE_20568_length_226_cov_5.216931_g20333_i0 PRJNA929940 20568 226 5.216931 11.79026406 Eurotiomycetes 147545 Fungi Fungi 418 1.7199999999999998e-112   NTclustered gi|4098984|gb|U81264.1|APU81264 41959 g20333 i0 100 100 226 0 100 0 1 226 361 136 Aspergillus penicillioides 28S ribosomal RNA gene, partial sequence blastn 22600 418 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus penicillioides
15282711 15282711 PRJNA929940_S_NODE_14612_length_258_cov_5.742081_g14377_i0 PRJNA929940 14612 258 5.742081 14.81456898 Eukaryota 2759 Fungi Fungi 202 2.1999999999999997e-47   NTclustered gi|2797496751|ref|XM_067691726.1| 273372 g14377 i0 82.819 89.5736434108527 227 37 88 2 1 226 20 245 Candida metapsilosis translation elongation factor EF-1 alpha (I9W82_002828), partial mRNA blastn 23110 202 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida metapsilosis
22586106 22586106 PRJNA929940_S_NODE_34338_length_186_cov_1.295302_g34103_i0 PRJNA929940 34338 186 1.295302 2.40926172 Limtongia smithiae 1125753 Fungi Fungi 52.8 0.016   NTclustered gi|2781505902|ref|XM_066903428.1| 1125753 g34103 i0 100 0.150537634408602 28 0 15 0 100 127 698 725 Limtongia smithiae uncharacterized protein (V1518DRAFT_413920), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Lipomycetes Lipomycetales Lipomycetaceae Limtongia Limtongia smithiae
22586119 22586119 PRJNA929940_S_NODE_9918_length_299_cov_1.614504_g9683_i0 PRJNA929940 9918 299 1.614504 4.82736696 Trichoderma atroviride 63577 Fungi Fungi 86.1 2.74e-12   NTclustered gi|2749703766|ref|XM_014090103.2| 63577 g9683 i0 88 1.47491638795987 75 6 25 1 26 100 2198 2269 Trichoderma atroviride uncharacterized protein (TrAtP1_012533), partial mRNA blastn 441 86.1 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma atroviride
22932612 22932612 PRJNA929940_S_NODE_53438_length_156_cov_2.243697_g53203_i0 PRJNA929940 53438 156 2.243697 3.50016732 root 1 Root_unresolved Root_unresolved 289 9e-74   NTclustered gi|2588676|dbj|AB008407.1| 5064 g53203 i0 100 100 156 0 100 0 1 156 1583 1428 Aspergillus restrictus gene for 18S rRNA, partial sequence blastn 15600 289 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus restrictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;