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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA929924" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929924 · 19 ✖

analysis 1

  • blastn · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
909082 909082 PRJNA929924_P_NODE_9901_length_248_cov_1.306533_g9738_i0 PRJNA929924 9901 248 1.306533 3.24020184 Adineta ricciae 249248 Rotifera other_Eukaryota 237 5.77e-58   NTclustered gi|421999039|emb|HE662874.1| 249248 g9738 i0 92.216 1 167 13 100 0 1 167 5371 5205 Adineta ricciae alien gene expression region, clone Ar_7 blastn 248 237 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
1254336 1254336 PRJNA929924_P_NODE_6941_length_408_cov_11.757660_g6778_i0 PRJNA929924 6941 408 11.75766 47.9712528 Eurotatoria 2816136 Rotifera other_Eukaryota 749 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g6778 i0 99.755 50.5220588235294 408 1 100 0 1 408 1921 1514 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 20613 749 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
2184173 2184173 PRJNA929924_P_NODE_10122_length_242_cov_1.077720_g9959_i0 PRJNA929924 10122 242 1.07772 2.6080824 Adineta vaga 104782 Rotifera other_Eukaryota 311 3.26e-80   NTclustered gi|189313895|gb|EU637017.1| 104782 g9959 i0 90.295 19.7066115702479 237 23 98 0 6 242 34854 34618 Adineta vaga glycoprotein gene, partial cds; and hypothetical proteins, DUF288 containing protein, hypothetical protein, methionine sulfoxide reductase, strabismus, S/T/Y kinase, integral membrane protein, plasma membrane calcium ATPase, myosin alkali light chain, hypothetical protein, hsp82, hypothetical protein, DUF288 containing protein, hypothetical protein, saicars, IBR containing protein, hypothetical proteins, NHL repeat containing protein, ubiquitin ligase, snf7, C2 containing protein, PKD channel, synaptotagmin, and hypothetical protein genes, complete cds blastn 4769 311 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8907189 8907189 PRJNA929924_P_NODE_7247_length_384_cov_2.400000_g7084_i0 PRJNA929924 7247 384 2.4 9.216 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 497 3.92e-136   NTclustered gi|402761741|gb|JX184002.1| 104786 g7084 i0 90.263 89.5260416666667 380 37 99 0 5 384 631 1010 Habrotrocha constricta cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 34378 497 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
9836929 9836929 PRJNA929924_P_NODE_3088_length_1087_cov_35.907514_g2999_i0 PRJNA929924 3088 1087 35.907514 390.31467718 Adineta vaga 104782 Rotifera other_Eukaryota 1836 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g2999 i0 97.151 86.4645814167433 1088 29 100 2 1 1087 7731 6645 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 93987 1836 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
9837081 9837081 PRJNA929924_S_NODE_5148_length_186_cov_1.570470_g5104_i0 PRJNA929924 5148 186 1.57047 2.9210742 Philodina citrina 468664 Rotifera other_Eukaryota 124 3.32e-24   NTclustered gi|407227484|emb|FR856884.1| 468664 g5104 i0 79.365 1.01612903225806 189 29 99 9 2 186 1973 1791 Philodina citrina complete mitochondrial genome blastn 189 124 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
9837087 9837087 PRJNA929924_S_NODE_7148_length_159_cov_1.508197_g7104_i0 PRJNA929924 7148 159 1.508197 2.39803323 Adineta vaga 104782 Rotifera other_Eukaryota 259 7.23e-65   NTclustered gi|259129963|gb|GQ398061.1| 104782 g7104 i0 98.63 2.58490566037736 146 2 92 0 14 159 10398 10253 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 411 259 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
11112478 11112478 PRJNA929924_P_NODE_11129_length_219_cov_2.288235_g10966_i0 PRJNA929924 11129 219 2.288235 5.01123465 Adineta vaga 104782 Rotifera other_Eukaryota 335 1.7199999999999992e-87   NTclustered gi|194500447|gb|EU850438.1| 104782 g10966 i0 94.144 22.4109589041096 222 10 100 2 1 219 26970 26749 Adineta vaga hypothetical protein 18 gene, partial cds; hypothetical protein 19, coatomer, GPCR, beta-transducin repeat, speckle-type POZ, adenosine kinase, prefoldin subunit, translation initiation factor eIF-4E, rho GTPase activating protein, histone H4, histone H3, histone H2B, and histone H2Av genes, complete cds; and mitochondrial ribosomal protein s22 gene, partial cds blastn 4908 335 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
12388045 12388045 PRJNA929924_P_NODE_15710_length_167_cov_1.762712_g15547_i0 PRJNA929924 15710 167 1.762712 2.94372904 Adineta ricciae 249248 Rotifera other_Eukaryota 298 1.63e-76   NTclustered gi|62362195|gb|AY942837.1| 249248 g15547 i0 98.802 1 167 2 100 0 1 167 107 273 Adineta ricciae ribosomal protein S7-like protein mRNA, complete cds blastn 167 298 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
12388210 12388210 PRJNA929924_P_NODE_9210_length_270_cov_11.343891_g9047_i0 PRJNA929924 9210 270 11.343891 30.6285057 Adineta vaga 104782 Rotifera other_Eukaryota 455 1.6100000000000002e-123   NTclustered gi|259129963|gb|GQ398061.1| 104782 g9047 i0 99.598 3.18148148148148 249 1 92 0 22 270 10398 10150 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 859 455 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14936947 14936947 PRJNA929924_P_NODE_5232_length_622_cov_1.617801_g5077_i0 PRJNA929924 5232 622 1.617801 10.06272222 Adineta ricciae 249248 Rotifera other_Eukaryota 869 0   NTclustered gi|37675448|gb|AY394701.1| 249248 g5077 i0 91.961 67.9823151125402 622 47 100 1 1 622 306 924 Adineta ricciae 82kD heat-shock protein gene (hsp82), partial sequence blastn 42285 869 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
16211986 16211986 PRJNA929924_P_NODE_7013_length_403_cov_3.257062_g6850_i0 PRJNA929924 7013 403 3.257062 13.12595986 Adineta vaga 104782 Rotifera other_Eukaryota 350 1.22e-91   NTclustered gi|194500447|gb|EU850438.1| 104782 g6850 i0 95.434 64.1116625310174 219 10 100 0 185 403 28388 28606 Adineta vaga hypothetical protein 18 gene, partial cds; hypothetical protein 19, coatomer, GPCR, beta-transducin repeat, speckle-type POZ, adenosine kinase, prefoldin subunit, translation initiation factor eIF-4E, rho GTPase activating protein, histone H4, histone H3, histone H2B, and histone H2Av genes, complete cds; and mitochondrial ribosomal protein s22 gene, partial cds blastn 25837 350 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16212015 16212015 PRJNA929924_P_NODE_9433_length_262_cov_5.845070_g9270_i0 PRJNA929924 9433 262 5.84507 15.3140834 Adineta vaga 104782 Rotifera other_Eukaryota 484 1.99e-132   NTclustered gi|259129963|gb|GQ398061.1| 104782 g9270 i0 100 74.9312977099237 262 0 100 0 1 262 4432 4171 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 19632 484 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
17487276 17487276 PRJNA929924_P_NODE_5374_length_597_cov_3.908759_g5218_i0 PRJNA929924 5374 597 3.908759 23.33529123 Philodina citrina 468664 Rotifera other_Eukaryota 654 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g5218 i0 86.789 32.3484087102178 598 66 99 12 1 592 2390 1800 Philodina citrina complete mitochondrial genome blastn 19312 654 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
18760493 18760493 PRJNA929924_P_NODE_13895_length_180_cov_1.587786_g13732_i0 PRJNA929924 13895 180 1.587786 2.8580148 Philodina roseola 96448 Rotifera other_Eukaryota 261 2.33e-65   NTclustered gi|197321819|gb|EU853695.1| 96448 g13732 i0 96.226 64.6666666666667 159 6 88 0 1 159 159 1 Philodina roseola histone H2A variant H2Av1 copy 1a (H2Av1) gene, partial cds blastn 11640 261 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
18760637 18760637 PRJNA929924_P_NODE_7875_length_340_cov_2.109966_g7712_i0 PRJNA929924 7875 340 2.109966 7.1738844 Philodina roseola 96448 Rotifera other_Eukaryota 399 9.959999999999998e-107   NTclustered gi|187936070|gb|EU652317.1| 96448 g7712 i0 94.253 84.8911764705882 261 15 77 0 2 262 20434 20694 Philodina roseola GTP binding protein, beta prime coatomer protein complex subunit, GPCR, beta-transducin repeat containing protein, speckle-type POZ protein, adenosine kinase, prefoldin subunit 1, translation initiation factor eIF-4E, Rho GTPase activating protein, histone H4, histone H3, histone H2B, histone H2Av, cleft lip and palate associated transmembrane protein, mitochondrial ribosomal protein s22, ribosomal protein s15a, hypothetical protein 20, START domain containing protein, and filament protein genes, complete cds blastn 28863 399 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
20035488 20035488 PRJNA929924_P_NODE_13696_length_182_cov_1.421053_g13533_i0 PRJNA929924 13696 182 1.421053 2.58631646 Adineta ricciae 249248 Rotifera other_Eukaryota 300 5.01e-77   NTclustered gi|403492564|gb|JX193021.1| 249248 g13533 i0 96.667 78.6318681318681 180 6 99 0 3 182 1014 835 Adineta ricciae isolate AU.1.2 alpha tubulin gene, partial cds blastn 14311 300 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
21310988 21310988 PRJNA929924_P_NODE_14717_length_171_cov_1.311475_g14554_i0 PRJNA929924 14717 171 1.311475 2.24262225 Adineta vaga 104782 Rotifera other_Eukaryota 150 4.939999999999999e-32   NTclustered gi|189313895|gb|EU637017.1| 104782 g14554 i0 86.232 1.5906432748538 138 19 81 0 1 138 27045 27182 Adineta vaga glycoprotein gene, partial cds; and hypothetical proteins, DUF288 containing protein, hypothetical protein, methionine sulfoxide reductase, strabismus, S/T/Y kinase, integral membrane protein, plasma membrane calcium ATPase, myosin alkali light chain, hypothetical protein, hsp82, hypothetical protein, DUF288 containing protein, hypothetical protein, saicars, IBR containing protein, hypothetical proteins, NHL repeat containing protein, ubiquitin ligase, snf7, C2 containing protein, PKD channel, synaptotagmin, and hypothetical protein genes, complete cds blastn 272 150 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
23861165 23861165 PRJNA929924_P_NODE_10359_length_236_cov_1.598930_g10196_i0 PRJNA929924 10359 236 1.59893 3.7734748 Adineta vaga 104782 Rotifera other_Eukaryota 329 8.73e-86   NTclustered gi|194500447|gb|EU850438.1| 104782 g10196 i0 91.949 17.4025423728814 236 17 100 2 1 236 26273 26040 Adineta vaga hypothetical protein 18 gene, partial cds; hypothetical protein 19, coatomer, GPCR, beta-transducin repeat, speckle-type POZ, adenosine kinase, prefoldin subunit, translation initiation factor eIF-4E, rho GTPase activating protein, histone H4, histone H3, histone H2B, and histone H2Av genes, complete cds; and mitochondrial ribosomal protein s22 gene, partial cds blastn 4107 329 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;