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contig_metadata

33 rows where analysis = "blastn", bioproject = "PRJNA929924" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA929924 · 33 ✖

analysis 1

  • blastn · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1254183 1254183 PRJNA929924_P_NODE_17161_length_164_cov_0.904348_g16998_i0 PRJNA929924 17161 164 0.904348 1.48313072 Encyonema 216746 SAR_Eukaryotes SAR_Eukaryotes 303 3.42e-78   NTclustered gi|168145699|emb|AM501961.1| 431330 g16998 i0 100 100 164 0 100 0 1 164 272 109 Encyonema minutum 18S rRNA gene, strain AT-137.13 blastn 16400 303 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Cymbellaceae Encyonema Encyonema minutum
2184379 2184379 PRJNA929924_P_NODE_6922_length_411_cov_1.599448_g6759_i0 PRJNA929924 6922 411 1.599448 6.57373128 Navicula tsukamotoi 2018706 SAR_Eukaryotes SAR_Eukaryotes 80.5 1.81e-10   NTclustered gi|2248495872|ref|NC_063457.1| 2018706 g6759 i0 86.486 1.74695863746959 74 8 18 2 18 89 38569 38496 Haslea tsukamotoi isolate Qingdao in China mitochondrion, complete genome blastn 718 80.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula tsukamotoi
2529873 2529873 PRJNA929924_P_NODE_15702_length_167_cov_1.762712_g15539_i0 PRJNA929924 15702 167 1.762712 2.94372904 Navicula 50949 SAR_Eukaryotes SAR_Eukaryotes 309 7.53e-80   NTclustered gi|168145917|emb|AM710568.1| 431397 g15539 i0 100 100 167 0 100 0 1 167 73 239 Navicula capitatoradiata partial 28S rRNA gene, strain AT-212Gel07 blastn 16700 309 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula capitatoradiata
2530064 2530064 PRJNA929924_P_NODE_8402_length_309_cov_6.592308_g8239_i0 PRJNA929924 8402 309 6.592308 20.37023172 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 571 1.7899999999999995e-158   NTclustered gi|1411267247|gb|MH549414.1| 88167 g8239 i0 100 60.1132686084142 309 0 100 0 1 309 294 602 Poterioochromonas malhamensis strain SAG933-1c internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 18575 571 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
2530325 2530325 PRJNA929924_S_NODE_5642_length_177_cov_7.628571_g5598_i0 PRJNA929924 5642 177 7.628571 13.50257067 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 326 7.98e-85   NTclustered gi|291495599|gb|GU823226.1| 152704 g5598 i0 100 99.4350282485876 176 0 99 0 1 176 867 1042 Uncultured stramenopile clone BCA5F13RJ3F09 18S ribosomal RNA gene, partial sequence blastn 17600 326 1 Eukaryota Sar             uncultured stramenopile
3806402 3806402 PRJNA929924_P_NODE_7223_length_386_cov_1.949555_g7060_i0 PRJNA929924 7223 386 1.949555 7.5252823 Cyclotella 29203 SAR_Eukaryotes SAR_Eukaryotes 686 0   NTclustered gi|691189876|gb|KJ958480.1| 1549163 g7060 i0 98.705 197.103626943005 386 5 100 0 1 386 70329 69944 Cyclotella sp. L04_2 chloroplast, complete genome blastn 76082 686 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella sp. L04_2
6012110 6012110 PRJNA929924_P_NODE_11685_length_209_cov_0.906250_g11522_i0 PRJNA929924 11685 209 0.90625 1.8940625 Nitzschia sp. (in: diatoms) 1884248 SAR_Eukaryotes SAR_Eukaryotes 342 9.709999999999999e-90   NTclustered gi|2862228875|gb|PQ645509.1| 1884248 g11522 i0 96.172 96.7655502392344 209 8 100 0 1 209 3871 3663 Nitzschia sp. (in: diatoms) isolate AGSB0363 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20224 342 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia sp. (in: diatoms)
6012148 6012148 PRJNA929924_P_NODE_15325_length_168_cov_1.310924_g15162_i0 PRJNA929924 15325 168 1.310924 2.20235232 Phytophthora capsici 4784 SAR_Eukaryotes SAR_Eukaryotes 99 1.79e-16   NTclustered gi|189083894|gb|BT031410.1| 4784 g15162 i0 79.71 0.821428571428571 138 26 82 2 4 140 182 46 Phytophthora capsici clone CBOT89-K20 mRNA sequence blastn 138 99 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
6358142 6358142 PRJNA929924_P_NODE_10265_length_238_cov_2.306878_g10102_i0 PRJNA929924 10265 238 2.306878 5.49036964 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 429 8.45e-116   NTclustered gi|2589355395|ref|NC_077461.1| 29204 g10102 i0 99.16 195.016806722689 238 2 100 0 1 238 70619 70856 Cyclotella cryptica chloroplast, complete genome blastn 46414 429 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
7632317 7632317 PRJNA929924_P_NODE_14666_length_171_cov_2.524590_g14503_i0 PRJNA929924 14666 171 2.52459 4.3170489 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 71.3 3.95e-8   NTclustered gi|288272|emb|X58846.1| 5911 g14503 i0 100 6.25730994152047 38 0 22 0 1 38 29 66 T.thermophila U2.2 snRNA blastn 1070 71.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
8561821 8561821 PRJNA929924_P_NODE_18467_length_153_cov_3.721154_g18304_i0 PRJNA929924 18467 153 3.721154 5.69336562 Stephanocyclus meneghinianus 29205 SAR_Eukaryotes SAR_Eukaryotes 283 4.0799999999999995e-72   NTclustered gi|66571056|emb|AJ878482.1| 29205 g18304 i0 100 97.1699346405229 153 0 100 0 1 153 96 248 Cyclotella meneghiniana partial 28S rRNA gene, strain Bpp02-9 blastn 14867 283 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Stephanocyclus Stephanocyclus meneghinianus
8561964 8561964 PRJNA929924_P_NODE_8527_length_302_cov_2.181818_g8364_i0 PRJNA929924 8527 302 2.181818 6.58909036 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 536 6.369999999999999e-148   NTclustered gi|859811083|gb|KM818001.1| 88167 g8364 i0 98.675 100.602649006623 302 4 100 0 1 302 2527 2226 Poterioochromonas malhamensis strain SAG 933.1c 23S ribosomal RNA gene, partial sequence; plastid blastn 30382 536 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
10183307 10183307 PRJNA929924_S_NODE_5168_length_185_cov_6.425676_g5124_i0 PRJNA929924 5168 185 6.425676 11.8875006 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 339 1.08e-88   NTclustered gi|291495599|gb|GU823226.1| 152704 g5124 i0 100 98.9621621621622 183 0 99 0 3 185 558 376 Uncultured stramenopile clone BCA5F13RJ3F09 18S ribosomal RNA gene, partial sequence blastn 18308 342 0.991228070175439 Eukaryota Sar             uncultured stramenopile
11112557 11112557 PRJNA929924_P_NODE_18249_length_162_cov_0.920354_g18086_i0 PRJNA929924 18249 162 0.920354 1.49097348 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 289 9.44e-74   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g18086 i0 98.765 96.1481481481482 162 2 100 0 1 162 30354 30515 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 15576 289 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
11112587 11112587 PRJNA929924_P_NODE_2969_length_1125_cov_2.315985_g2881_i0 PRJNA929924 2969 1125 2.315985 26.05483125 Leukarachnion sp. ATCC PRA-24 568390 SAR_Eukaryotes SAR_Eukaryotes 241 2.28e-58   NTclustered gi|2727570083|gb|PP760457.1| 568390 g2881 i0 77.06 3.09422222222222 449 83 59 18 620 1057 2723 2284 Leukarachnion sp. ATCC PRA-24 culture ATCC:BJ-24B2 mitochondrion, complete genome blastn 3481 241 1 Eukaryota Sar             Leukarachnion sp. ATCC PRA-24
12388042 12388042 PRJNA929924_P_NODE_15310_length_168_cov_1.411765_g15147_i0 PRJNA929924 15310 168 1.411765 2.3717652 Heterococcus caespitosus 55585 SAR_Eukaryotes SAR_Eukaryotes 283 4.6e-72   NTclustered gi|157411020|gb|EF990191.1| 55585 g15147 i0 97.024 84.7440476190476 168 5 100 0 1 168 1699 1866 Heterococcus caespitosus large subunit ribosomal RNA gene, partial sequence blastn 14237 283 1 Eukaryota Sar     Xanthophyceae Tribonematales Heteropediaceae Heterococcus Heterococcus caespitosus
12733554 12733554 PRJNA929924_P_NODE_11690_length_208_cov_2.578616_g11527_i0 PRJNA929924 11690 208 2.578616 5.36352128 Cyclotella 29203 SAR_Eukaryotes SAR_Eukaryotes 385 1.58e-102   NTclustered gi|2589355395|ref|NC_077461.1| 29204 g11527 i0 100 199.870192307692 208 0 100 0 1 208 69748 69541 Cyclotella cryptica chloroplast, complete genome blastn 41573 385 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
13662697 13662697 PRJNA929924_P_NODE_8931_length_282_cov_2.231760_g8768_i0 PRJNA929924 8931 282 2.23176 6.2935632 Navicula veneta 138539 SAR_Eukaryotes SAR_Eukaryotes 438 1.7099999999999999e-118   NTclustered gi|2088232805|ref|NC_056793.1| 138539 g8768 i0 94.681 105.641843971631 282 15 100 0 1 282 22657 22376 Navicula veneta isolate SZCZR1826 mitochondrion, complete genome blastn 29791 438 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula veneta
15282154 15282154 PRJNA929924_P_NODE_17812_length_163_cov_0.912281_g17649_i0 PRJNA929924 17812 163 0.912281 1.48701803 Bacillariophyceae 33849 SAR_Eukaryotes SAR_Eukaryotes 248 1.61e-61   NTclustered gi|2199203925|ref|NC_061049.1| 3003 g17649 i0 95.484 105.668711656442 155 7 95 0 7 161 47541 47387 Bacillaria paxillifer chloroplast, complete genome blastn 17224 248 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Bacillaria Bacillaria paxillifer
16211807 16211807 PRJNA929924_P_NODE_10413_length_235_cov_1.118280_g10250_i0 PRJNA929924 10413 235 1.11828 2.627958 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 385 1.83e-102   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g10250 i0 96.17 91.8425531914894 235 9 100 0 1 235 19776 20010 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 21583 385 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
17487142 17487142 PRJNA929924_P_NODE_12354_length_198_cov_1.093960_g12191_i0 PRJNA929924 12354 198 1.09396 2.1660408 Navicula sp. 1923966 SAR_Eukaryotes SAR_Eukaryotes 344 2.53e-90   NTclustered gi|2633304288|gb|OR795085.1| 1923966 g12191 i0 97.98 199.116161616162 198 4 100 0 1 198 80402 80205 Navicula sp. strain SZCZEY2262 plastid, complete genome blastn 39425 344 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula sp.
17487325 17487325 PRJNA929924_P_NODE_8654_length_296_cov_1.311741_g8491_i0 PRJNA929924 8654 296 1.311741 3.88275336 Stephanocyclus meneghinianus 29205 SAR_Eukaryotes SAR_Eukaryotes 542 1.34e-149   NTclustered gi|66571061|emb|AJ878487.1| 29205 g8491 i0 99.662 99.6385135135135 296 1 100 0 1 296 552 257 Cyclotella meneghiniana partial 28S rRNA gene, strain AT-cm4 blastn 29493 542 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Stephanocyclus Stephanocyclus meneghinianus
17831724 17831724 PRJNA929924_P_NODE_13354_length_185_cov_6.852941_g13191_i0 PRJNA929924 13354 185 6.852941 12.67794085 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 340 3.0099999999999993e-89   NTclustered gi|323690576|gb|GU935635.1| 88167 g13191 i0 100 96.1567567567568 184 0 99 0 2 185 1657 1474 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 17789 340 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
18760471 18760471 PRJNA929924_P_NODE_11875_length_205_cov_5.525641_g11712_i0 PRJNA929924 11875 205 5.525641 11.32756405 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 377 2.6e-100   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g11712 i0 100 95.4341463414634 204 0 99 0 2 205 13145 13348 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 19564 377 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
19105624 19105624 PRJNA929924_P_NODE_15975_length_167_cov_0.881356_g15812_i0 PRJNA929924 15975 167 0.881356 1.47186452 Thalassiosirales 33847 SAR_Eukaryotes SAR_Eukaryotes 278 2.12e-70   NTclustered gi|74325165|ref|NC_007405.1| 35128 g15812 i0 96.97 96.7844311377246 165 5 99 0 1 165 12644 12480 Thalassiosira pseudonana mitochondrion, complete genome blastn 16163 278 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
20035464 20035464 PRJNA929924_P_NODE_11556_length_211_cov_1.925926_g11393_i0 PRJNA929924 11556 211 1.925926 4.06370386 Navicula capitatoradiata 431397 SAR_Eukaryotes SAR_Eukaryotes 381 2.0799999999999996e-101   NTclustered gi|168145917|emb|AM710568.1| 431397 g11393 i0 99.052 99.8151658767773 211 2 100 0 1 211 533 323 Navicula capitatoradiata partial 28S rRNA gene, strain AT-212Gel07 blastn 21061 381 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula capitatoradiata
20035522 20035522 PRJNA929924_P_NODE_17876_length_163_cov_0.912281_g17713_i0 PRJNA929924 17876 163 0.912281 1.48701803 Thalassiosira pseudonana 35128 SAR_Eukaryotes SAR_Eukaryotes 180 5.97e-41   NTclustered gi|224009701|ref|XM_002293773.1| 296543 g17713 i0 86.503 1 163 22 100 0 1 163 314 152 Thalassiosira pseudonana CCMP1335 RS25, ribosomal protein 25 40S small ribosomal subunit (RS25), mRNA blastn 163 180 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
21311051 21311051 PRJNA929924_P_NODE_3597_length_946_cov_22.789298_g3484_i0 PRJNA929924 3597 946 22.789298 215.58675908 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 1720 0   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g3484 i0 99.471 92.5042283298097 946 5 100 0 1 946 17735 16790 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 87509 1720 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
22585866 22585866 PRJNA929924_P_NODE_13618_length_183_cov_1.246269_g13455_i0 PRJNA929924 13618 183 1.246269 2.28067227 Rosculus piscicus 2231164 SAR_Eukaryotes SAR_Eukaryotes 191 3.17e-44   NTclustered gi|1402550472|gb|MH488758.1| 2231164 g13455 i0 85.484 6.45901639344262 186 23 100 4 1 183 830 1014 Rosculus piscicus isolate GS5C small subunit ribosomal RNA gene, partial sequence blastn 1182 191 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus piscicus
22585870 22585870 PRJNA929924_P_NODE_14398_length_175_cov_1.238095_g14235_i0 PRJNA929924 14398 175 1.238095 2.16666625 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 285 1.3399999999999998e-72   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g14235 i0 96 96.4228571428571 175 7 100 0 1 175 87807 87633 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 16874 285 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
24205774 24205774 PRJNA929924_P_NODE_16619_length_165_cov_1.758621_g16456_i0 PRJNA929924 16619 165 1.758621 2.90172465 Naviculales 38748 SAR_Eukaryotes SAR_Eukaryotes 305 9.59e-79   NTclustered gi|1418587827|ref|NC_038001.1| 186043 g16456 i0 100 99.2363636363636 165 0 100 0 1 165 105904 106068 Entomoneis sp. chloroplast, complete genome blastn 16374 305 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae   Entomoneidaceae Entomoneis Entomoneis sp.
25135004 25135004 PRJNA929924_P_NODE_10040_length_244_cov_0.917949_g9877_i0 PRJNA929924 10040 244 0.917949 2.23979556 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 412 8.759999999999998e-111   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g9877 i0 97.143 101.08196721311501 245 6 100 1 1 244 18764 18520 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 24664 412 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
25480751 25480751 PRJNA929924_P_NODE_14640_length_172_cov_1.186992_g14477_i0 PRJNA929924 14640 172 1.186992 2.04162624 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 307 2.79e-79   NTclustered gi|291495599|gb|GU823226.1| 152704 g14477 i0 98.837 100 172 2 100 0 1 172 680 851 Uncultured stramenopile clone BCA5F13RJ3F09 18S ribosomal RNA gene, partial sequence blastn 17200 307 1 Eukaryota Sar             uncultured stramenopile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;