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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA929922" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929922 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
905581 905581 PRJNA929922_P_NODE_111521_length_250_cov_0.870056_g110981_i0 PRJNA929922 111521 250 0.870056 2.17514 Akkermansia massiliensis 2927224 Bacteria Bacteria 457 4.1099999999999985e-124   NTclustered gi|1805957841|gb|CP029701.1| 2927224 g110981 i0 99.6 99.832 250 1 100 0 1 250 946433 946682 Akkermansia massiliensis strain EB-AMDK-40 chromosome, complete genome blastn 24958 457 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia massiliensis
2181346 2181346 PRJNA929922_P_NODE_130362_length_247_cov_0.885057_g129822_i0 PRJNA929922 130362 247 0.885057 2.18609079 Opitutus terrae 107709 Bacteria Bacteria 207 4.4999999999999994e-49   NTclustered gi|177839040|gb|CP001032.1| 452637 g129822 i0 82.553 0.951417004048583 235 41 95 0 13 247 1725396 1725162 Opitutus terrae PB90-1, complete genome blastn 235 207 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
3805513 3805513 PRJNA929922_P_NODE_122783_length_248_cov_0.880000_g122243_i0 PRJNA929922 122783 248 0.88 2.1824 Akkermansia 239934 Bacteria Bacteria 459 1.13e-124   NTclustered gi|2051350654|gb|CP072036.1| 2927224 g122243 i0 100 99.6532258064516 248 0 100 0 1 248 1678452 1678699 Akkermansia massiliensis strain Akk1573 chromosome, complete genome blastn 24714 459 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia massiliensis
7283587 7283587 PRJNA929922_P_NODE_107646_length_251_cov_0.865169_g107106_i0 PRJNA929922 107646 251 0.865169 2.17157419 Akkermansia muciniphila 239935 Bacteria Bacteria 464 2.47e-126   NTclustered gi|1805906055|gb|CP027004.1| 239935 g107106 i0 100 142.509960159363 251 0 100 0 1 251 1594854 1594604 Akkermansia muciniphila strain EB-AMDK-28 chromosome, complete genome blastn 35770 464 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia muciniphila
11109218 11109218 PRJNA929922_P_NODE_113649_length_250_cov_0.870056_g113109_i0 PRJNA929922 113649 250 0.870056 2.17514 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 159 1.3e-34   NTclustered gi|2874253974|emb|OY970299.1| 412056 g113109 i0 84.81 1.048 158 24 63 0 92 249 3088179 3088336 MAG: uncultured Verrucomicrobiae bacterium isolate MFD09603.bin.1.43 genome assembly, chromosome: 1 blastn 262 159 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
11109889 11109889 PRJNA929922_P_NODE_146049_length_244_cov_0.900585_g145509_i0 PRJNA929922 146049 244 0.900585 2.1974274 Akkermansia massiliensis 2927224 Bacteria Bacteria 451 1.86e-122   NTclustered gi|1805957841|gb|CP029701.1| 2927224 g145509 i0 100 49.5819672131148 244 0 100 0 1 244 1017972 1017729 Akkermansia massiliensis strain EB-AMDK-40 chromosome, complete genome blastn 12098 451 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia massiliensis
12384617 12384617 PRJNA929922_P_NODE_108170_length_251_cov_0.865169_g107630_i0 PRJNA929922 108170 251 0.865169 2.17157419 Nibricoccus sp. IMCC34717 3034021 Bacteria Bacteria 178 3.6e-40   NTclustered gi|2850969968|gb|CP119759.1| 3034021 g107630 i0 81.905 50.9402390438247 210 38 84 0 42 251 3211703 3211494 Nibricoccus sp. IMCC34717 chromosome, complete genome blastn 12786 178 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Nibricoccus Nibricoccus sp. IMCC34717
17483834 17483834 PRJNA929922_P_NODE_112194_length_250_cov_0.870056_g111654_i0 PRJNA929922 112194 250 0.870056 2.17514 Lacunisphaera limnophila 1838286 Bacteria Bacteria 351 1.99e-92   NTclustered gi|1070531674|gb|CP016094.1| 1838286 g111654 i0 92 32.452 250 20 100 0 1 250 893305 893056 Lacunisphaera limnophila strain IG16b, complete genome blastn 8113 351 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera limnophila
17485927 17485927 PRJNA929922_P_NODE_91134_length_266_cov_1.595855_g90594_i0 PRJNA929922 91134 266 1.595855 4.2449743 Verrucomicrobia bacterium IMCC26134 1637999 Bacteria Bacteria 298 2.8299999999999997e-76   NTclustered gi|807238858|gb|CP011265.1| 1637999 g90594 i0 86.891 1.00375939849624 267 33 100 2 1 266 3439945 3440210 Verrucomicrobia bacterium IMCC26134, complete genome blastn 267 298 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium IMCC26134
20033144 20033144 PRJNA929922_P_NODE_155336_length_242_cov_0.911243_g154796_i0 PRJNA929922 155336 242 0.911243 2.20520806 Akkermansia muciniphila 239935 Bacteria Bacteria 448 2.3799999999999995e-121   NTclustered gi|1554502134|gb|CP025835.1| 239935 g154796 i0 100 99.8099173553719 242 0 100 0 1 242 2458307 2458066 Akkermansia muciniphila strain EB-AMDK-20 chromosome, complete genome blastn 24154 448 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia muciniphila
22582968 22582968 PRJNA929922_P_NODE_125498_length_248_cov_0.880000_g124958_i0 PRJNA929922 125498 248 0.88 2.1824 Lacunisphaera limnophila 1838286 Bacteria Bacteria 183 7.62e-42   NTclustered gi|1070531674|gb|CP016094.1| 1838286 g124958 i0 81.333 0.907258064516129 225 42 91 0 7 231 4003631 4003407 Lacunisphaera limnophila strain IG16b, complete genome blastn 225 183 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera limnophila
23858437 23858437 PRJNA929922_P_NODE_133999_length_246_cov_0.890173_g133459_i0 PRJNA929922 133999 246 0.890173 2.18982558 Opitutus sp. GAS368 1882749 Bacteria Bacteria 219 2.07e-52   NTclustered gi|1085764882|emb|LT629735.1| 1882749 g133459 i0 82.857 75.4024390243902 245 40 99 2 1 244 522624 522381 Opitutus sp. GAS368 genome assembly, chromosome: I blastn 18549 219 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp. GAS368
23858586 23858586 PRJNA929922_P_NODE_141019_length_245_cov_0.895349_g140479_i0 PRJNA929922 141019 245 0.895349 2.19360505 Nibricoccus aquaticus 2576891 Bacteria Bacteria 207 4.46e-49   NTclustered gi|1243404978|gb|CP023344.1| 2576891 g140479 i0 82.305 0.991836734693878 243 39 98 3 5 245 410576 410336 Nibricoccus aquaticus strain HZ-65 chromosome, complete genome blastn 243 207 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Nibricoccus Nibricoccus aquaticus
25132446 25132446 PRJNA929922_P_NODE_144220_length_244_cov_0.900585_g143680_i0 PRJNA929922 144220 244 0.900585 2.1974274 Opitutia bacterium KCR 482 3034326 Bacteria Bacteria 215 2.65e-51   NTclustered gi|2707273910|gb|CP149973.1| 3034326 g143680 i0 82.731 2.11065573770492 249 35 100 6 1 244 1508250 1508005 Opitutia bacterium KCR 482 chromosome, complete genome blastn 515 215 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium KCR 482

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;