RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA929922" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929922 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3457489 3457489 PRJNA929922_P_NODE_160043_length_241_cov_1.375000_g159503_i0 PRJNA929922 160043 241 1.375 3.31375 Adineta vaga 104782 Rotifera other_Eukaryota 108 4.56e-19   NTclustered gi|188501658|gb|EU643488.1| 104782 g159503 i0 76.526 1.76763485477178 213 40 86 9 33 240 11203 10996 Adineta vaga clone 161F07 NHL repeat containing-like protein gene, complete cds; transposons helitron-like and pogo-like, complete sequence; FAD-binding monooxygenase-like protein gene, complete cds; retrotransposons Athena-AvN and Athena, complete sequence; and diadenosine tetraphosphate hydrolase HIT family-like protein gene, complete cds blastn 426 108 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8558544 8558544 PRJNA929922_P_NODE_114167_length_250_cov_0.870056_g113627_i0 PRJNA929922 114167 250 0.870056 2.17514 Adineta vaga 104782 Rotifera other_Eukaryota 252 2.08e-62   NTclustered gi|259129963|gb|GQ398061.1| 104782 g113627 i0 86.555 0.952 238 20 95 5 4 240 3789 3563 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 238 252 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
12385403 12385403 PRJNA929922_P_NODE_145230_length_244_cov_0.900585_g144690_i0 PRJNA929922 145230 244 0.900585 2.1974274 Adineta vaga 104782 Rotifera other_Eukaryota 108 4.63e-19   NTclustered gi|188501561|gb|EU643479.1| 104782 g144690 i0 79.355 0.635245901639344 155 30 63 2 72 225 36844 36997 Adineta vaga clone Av_TEL_L_A putative lipoprotein-like protein and DUF1628-like protein genes, complete cds; transposons piggyBac-like and transposons, complete sequence; NmrA family protein-like protein, GIMAP7 GTPase, ankyrin repeat protein-like protein, TPR repeat containing protein-like protein, beta-D-galactosidase, NHL repeat containing protein, GCN5-related N-acetyltransferase-like protein, galactosylceramidase, tetratricopeptide repeat family-like protein, TPR repeat containing protein-like protein, and kelch domain protein-like protein genes, complete cds; and unknown genes blastn 155 108 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;