RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA929922" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929922 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
907152 907152 PRJNA929922_P_NODE_54961_length_315_cov_0.954545_g54421_i0 PRJNA929922 54961 315 0.954545 3.00681675 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.029   NTclustered gi|690511386|emb|LN061356.1| 99802 g54421 i0 100 0.0888888888888889 28 0 9 0 246 273 4587 4614 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0059436 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
3456947 3456947 PRJNA929922_P_NODE_134323_length_246_cov_0.890173_g133783_i0 PRJNA929922 134323 246 0.890173 2.18982558 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|687220340|emb|LN423908.1| 99802 g133783 i0 100 0.113821138211382 28 0 11 0 124 151 445 472 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0174386 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
14933738 14933738 PRJNA929922_P_NODE_122552_length_248_cov_0.880000_g122012_i0 PRJNA929922 122552 248 0.88 2.1824 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|690459632|emb|LN002133.1| 99802 g122012 i0 100 0.112903225806452 28 0 11 0 91 118 17737 17710 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0002116 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
21309977 21309977 PRJNA929922_S_NODE_12877_length_398_cov_48.538462_g12653_i0 PRJNA929922 12877 398 48.538462 193.18307876 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 641 1.7799999999999994e-179   NTclustered gi|56757963|gb|AY815390.1| 6182 g12653 i0 96.203 120.623115577889 395 9 99 3 4 394 1732 2124 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 48008 641 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
21310717 21310717 PRJNA929922_S_NODE_62337_length_249_cov_2.431818_g62113_i0 PRJNA929922 62337 249 2.431818 6.05522682 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 200 7.61e-47   NTclustered gi|56757963|gb|AY815390.1| 6182 g62113 i0 96.667 58.4417670682731 120 4 48 0 1 120 1925 1806 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 14552 200 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
21310813 21310813 PRJNA929922_S_NODE_67777_length_243_cov_1.523529_g67553_i0 PRJNA929922 67777 243 1.523529 3.70217547 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 346 8.97e-91   NTclustered gi|60598617|gb|AY809969.1| 6182 g67553 i0 92.623 31.8395061728395 244 12 100 4 1 241 295 55 Schistosoma japonicum SJCHGC07053 protein mRNA, partial cds blastn 7737 346 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
21310862 21310862 PRJNA929922_S_NODE_7077_length_467_cov_49.895939_g6853_i0 PRJNA929922 7077 467 49.895939 233.01403513 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 479 1.7599999999999996e-130   NTclustered gi|56757963|gb|AY815390.1| 6182 g6853 i0 95.946 99.4432548179872 296 11 98 1 5 300 1444 1150 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 46440 479 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
22583334 22583334 PRJNA929922_P_NODE_144058_length_244_cov_0.900585_g143518_i0 PRJNA929922 144058 244 0.900585 2.1974274 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|687756848|emb|LK438967.1| 57078 g143518 i0 100 0.114754098360656 28 0 11 0 197 224 1648 1621 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0044212 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
22584897 22584897 PRJNA929922_S_NODE_13518_length_393_cov_2.925000_g13294_i0 PRJNA929922 13518 393 2.925 11.49525 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 436 8.879999999999999e-118   NTclustered gi|60698656|gb|AY915745.1| 6182 g13294 i0 98.776 12.5445292620865 245 3 62 0 149 393 467 223 Schistosoma japonicum SJCHGC09658 protein mRNA, partial cds blastn 4930 436 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23860418 23860418 PRJNA929922_S_NODE_26779_length_324_cov_18.031873_g26555_i0 PRJNA929922 26779 324 18.031873 58.42326852 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 475 1.52e-129   NTclustered gi|56757963|gb|AY815390.1| 6182 g26555 i0 95.638 94.9074074074074 298 10 91 3 25 320 698 994 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 30750 475 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25134361 25134361 PRJNA929922_S_NODE_33840_length_304_cov_1.896104_g33616_i0 PRJNA929922 33840 304 1.896104 5.76415616 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 481 3.05e-131   NTclustered gi|1084315499|ref|XM_018792062.1| 6183 g33616 i0 96.864 47.4473684210526 287 9 94 0 15 301 47 333 Schistosoma mansoni hypothetical protein partial mRNA blastn 14424 481 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
25134948 25134948 PRJNA929922_S_NODE_74360_length_202_cov_24.341085_g74136_i0 PRJNA929922 74360 202 24.341085 49.1689917 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 344 2.59e-90   NTclustered gi|56757963|gb|AY815390.1| 6182 g74136 i0 97.525 124.004950495049 202 4 100 1 1 202 1840 2040 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 25049 344 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;