RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA929922" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929922 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13662106 13662106 PRJNA929922_S_NODE_51931_length_266_cov_1.917098_g51707_i0 PRJNA929922 51931 266 1.917098 5.09948068 Lytechinus pictus 7653 Echinodermata other_Eukaryota 60.2 1.45e-4   NTclustered gi|2707366279|ref|XR_010296322.1| 7653 g51707 i0 100 0.120300751879699 32 0 12 0 176 207 447 416 PREDICTED: Lytechinus pictus uncharacterized LOC135157315 (LOC135157315), ncRNA blastn 32 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
25131527 25131527 PRJNA929922_P_NODE_100560_length_256_cov_1.551913_g100020_i0 PRJNA929922 100560 256 1.551913 3.97289728 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.023   NTclustered gi|1752388098|ref|XM_030996825.1| 7668 g100020 i0 96.774 0.12109375 31 1 12 0 217 247 2507 2477 PREDICTED: Strongylocentrotus purpuratus piggyBac transposable element-derived protein 4-like (LOC105441836), mRNA blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;