RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA929922" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA929922 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6009394 6009394 PRJNA929922_P_NODE_139825_length_245_cov_0.895349_g139285_i0 PRJNA929922 139825 245 0.895349 2.19360505 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g139285 i0 100 0.114285714285714 28 0 11 0 1 28 11 38 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
6011920 6011920 PRJNA929922_S_NODE_64545_length_247_cov_0.885057_g64321_i0 PRJNA929922 64545 247 0.885057 2.18609079 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g64321 i0 100 0.230769230769231 29 0 12 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
7286641 7286641 PRJNA929922_S_NODE_57466_length_257_cov_1.228261_g57242_i0 PRJNA929922 57466 257 1.228261 3.15663077 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g57242 i0 100 0.463035019455253 30 0 12 0 228 257 41 12 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 119 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
12386511 12386511 PRJNA929922_P_NODE_70590_length_290_cov_3.921659_g70050_i0 PRJNA929922 70590 290 3.921659 11.3728111 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g70050 i0 100 0.486206896551724 29 0 10 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
16211261 16211261 PRJNA929922_S_NODE_40773_length_288_cov_1.320930_g40549_i0 PRJNA929922 40773 288 1.32093 3.8042784 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g40549 i0 100 0.197916666666667 29 0 10 0 260 288 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
17483900 17483900 PRJNA929922_P_NODE_115794_length_250_cov_0.864407_g115254_i0 PRJNA929922 115794 250 0.864407 2.1610175 Sterkiella histriomuscorum 94289 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|47175722|gb|AY617302.1| 94289 g115254 i0 100 0.12 30 0 12 0 221 250 578 607 Sterkiella histriomuscorum clone UGC1O0001_K22_F genomic sequence blastn 30 56.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
20035112 20035112 PRJNA929922_S_NODE_54336_length_262_cov_1.629630_g54112_i0 PRJNA929922 54336 262 1.62963 4.2696306 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.024   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g54112 i0 100 0.106870229007634 28 0 11 0 1 28 10 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;