RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA929922" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929922 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2181543 2181543 PRJNA929922_P_NODE_139382_length_245_cov_0.895349_g138842_i0 PRJNA929922 139382 245 0.895349 2.19360505 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 436 5.229999999999999e-118   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g138842 i0 98.776 1 245 3 100 0 1 245 2448775 2449019 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 245 436 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
6008876 6008876 PRJNA929922_P_NODE_114465_length_250_cov_0.870056_g113925_i0 PRJNA929922 114465 250 0.870056 2.17514 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 195 3.55e-45   NTclustered gi|2874253766|emb|OY969711.1| 1672391 g113925 i0 81.224 2.28 245 42 97 4 3 245 1488479 1488721 MAG: uncultured Chloroflexia bacterium isolate MFD09730.bin.c.1 genome assembly, chromosome: 1 blastn 570 195 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
6009647 6009647 PRJNA929922_P_NODE_152685_length_243_cov_0.905882_g152145_i0 PRJNA929922 152685 243 0.905882 2.20129326 Ktedonobacteria bacterium brp13 2717365 Bacteria Bacteria 326 1.17e-84   NTclustered gi|1915456248|dbj|AP024096.1| 2717365 g152145 i0 90.909 1.9917695473251 242 22 99 0 1 242 1732779 1733020 Ktedonobacteria bacterium brp13 DNA, complete genome blastn 484 326 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria       Ktedonobacteria bacterium brp13
16211571 16211571 PRJNA929922_S_NODE_61833_length_250_cov_1.305085_g61609_i0 PRJNA929922 61833 250 1.305085 3.2627125 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 370 5.499999999999999e-98   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g61609 i0 96.847 285.392 222 5 89 2 29 250 1859193 1859412 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 71348 370 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
18759080 18759080 PRJNA929922_P_NODE_78355_length_281_cov_1.139423_g77815_i0 PRJNA929922 78355 281 1.139423 3.20177863 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 233 8.62e-57   NTclustered gi|2874254133|emb|OY970218.1| 1672391 g77815 i0 82.042 90.0284697508897 284 42 100 7 1 281 898620 898343 MAG: uncultured Chloroflexia bacterium isolate MFD04716.bin.1.117 genome assembly, chromosome: 1 blastn 25298 233 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
25132695 25132695 PRJNA929922_P_NODE_155500_length_242_cov_0.911243_g154960_i0 PRJNA929922 155500 242 0.911243 2.20520806 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 198 2.6499999999999997e-46   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g154960 i0 83.333 48.3719008264463 222 29 90 8 7 224 1360275 1360492 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 11706 198 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
25133341 25133341 PRJNA929922_P_NODE_54180_length_316_cov_1.267490_g53640_i0 PRJNA929922 54180 316 1.26749 4.0052684 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 261 4.52e-65   NTclustered gi|2874253812|emb|OY969796.1| 1672391 g53640 i0 81.646 14.2120253164557 316 56 99 2 2 316 1180645 1180959 MAG: uncultured Chloroflexia bacterium isolate MFD01872.bin.1.103 genome assembly, chromosome: 1 blastn 4491 261 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;