RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA929922" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA929922 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
905858 905858 PRJNA929922_P_NODE_124901_length_248_cov_0.880000_g124361_i0 PRJNA929922 124901 248 0.88 2.1824 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|1620139127|ref|XM_028675255.1| 85471 g124361 i0 96.875 0.129032258064516 32 1 13 0 35 66 801 770 Plasmodium relictum conserved Plasmodium protein, unknown function (PRELSG_0501100), partial mRNA blastn 32 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
3459226 3459226 PRJNA929922_S_NODE_41803_length_285_cov_7.688679_g41579_i0 PRJNA929922 41803 285 7.688679 21.91273515 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 490 4.71e-134   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g41579 i0 98.221 1284.00701754386 281 4 98 1 1 280 1618 1338 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 365942 490 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
4735156 4735156 PRJNA929922_P_NODE_17104_length_443_cov_0.767568_g16569_i0 PRJNA929922 17104 443 0.767568 3.40032624 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.012   NTclustered gi|820697327|tpe|LN714495.1| 432359 g16569 i0 88.889 0.164785553047404 45 3 10 2 296 338 1641942 1641986 TPA_asm: Toxoplasma gondii VEG, chromosome chrVI, complete genome blastn 73 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
6009210 6009210 PRJNA929922_P_NODE_130565_length_247_cov_0.885057_g130025_i0 PRJNA929922 130565 247 0.885057 2.18609079 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 412 8.89e-111   NTclustered gi|820695469|tpe|LN714488.1| 572307 g130025 i0 96.761 49.0404858299595 247 8 100 0 1 247 116351 116105 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 12113 412 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
7632179 7632179 PRJNA929922_S_NODE_63286_length_248_cov_1.760000_g63062_i0 PRJNA929922 63286 248 1.76 4.3648 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 379 9.059999999999998e-101   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g63062 i0 94.048 1073.25403225806 252 11 100 3 1 248 551 300 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 266167 379 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
11457276 11457276 PRJNA929922_P_NODE_133189_length_246_cov_0.890173_g132649_i0 PRJNA929922 133189 246 0.890173 2.18982558 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|2785762323|ref|XM_067216070.1| 5824 g132649 i0 100 0.341463414634146 28 0 11 0 51 78 244 271 Plasmodium brasilianum heptatricopeptide repeat-containing protein (MKS88_003015), partial mRNA blastn 84 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
18757903 18757903 PRJNA929922_P_NODE_146575_length_244_cov_0.900585_g146035_i0 PRJNA929922 146575 244 0.900585 2.1974274 Plasmodium coatneyi 208452 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|1139858862|ref|XM_020057237.1| 208452 g146035 i0 100 0.114754098360656 28 0 11 0 134 161 1175 1148 Plasmodium coatneyi Uncharacterized protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium coatneyi
22584434 22584434 PRJNA929922_P_NODE_70998_length_290_cov_1.184332_g70458_i0 PRJNA929922 70998 290 1.184332 3.4345628 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|820698945|tpe|LN714498.1| 432359 g70458 i0 94.444 0.124137931034483 36 1 12 1 11 46 2740492 2740458 TPA_asm: Toxoplasma gondii VEG, chromosome chrVIII, complete genome blastn 36 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;