RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA929922" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA929922 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20032488 20032488 PRJNA929922_P_NODE_124256_length_248_cov_0.880000_g123716_i0 PRJNA929922 124256 248 0.88 2.1824 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 375 1.1699999999999999e-99   NTclustered gi|937513727|gb|CP012850.1| 1353260 g123716 i0 93.952 1 248 15 100 0 1 248 1774650 1774897 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 248 375 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
22585743 22585743 PRJNA929922_S_NODE_70518_length_238_cov_10.151515_g70294_i0 PRJNA929922 70518 238 10.151515 24.1606057 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.021   NTclustered gi|323706731|gb|CP002529.1| 985053 g70294 i0 100 0.117647058823529 28 0 12 0 60 87 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
22585782 22585782 PRJNA929922_S_NODE_74198_length_206_cov_18.203008_g73974_i0 PRJNA929922 74198 206 18.203008 37.49819648 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.018   NTclustered gi|323706731|gb|CP002529.1| 985053 g73974 i0 100 0.135922330097087 28 0 14 0 156 183 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;