RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA929522" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJNA929522 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
905373 905373 PRJNA929522_S_NODE_7741_length_260_cov_2.331551_g7671_i0 PRJNA929522 7741 260 2.331551 6.0620326 Caudoviricetes sp. 2832643 Viruses Viruses 54.7 0.007   NTclustered gi|2914964766|gb|OR222006.1| 2832643 g7671 i0 100 0.111538461538462 29 0 11 0 45 73 15156 15184 MAG: Caudoviricetes sp. isolate MSP0115 genomic sequence blastn 29 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18756862 18756862 PRJNA929522_S_NODE_2255_length_443_cov_2.164865_g2185_i0 PRJNA929522 2255 443 2.164865 9.59035195 Backyardiganvirus noelle 2955405 Viruses Viruses 54.7 0.012   NTclustered gi|2039519488|ref|NC_054801.1| 2572317 g2185 i0 100 0.0654627539503386 29 0 7 0 261 289 2536 2508 Mycobacterium phage Noelle, complete genome blastn 29 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Backyardiganvirus Backyardiganvirus noelle
25131476 25131476 PRJNA929522_S_NODE_2800_length_399_cov_1.361963_g2730_i0 PRJNA929522 2800 399 1.361963 5.43423237 Mus musculus mobilized endogenous polytropic provirus 590745 Viruses Viruses 737 0   NTclustered gi|1013825125|gb|FJ544578.2| 590745 g2730 i0 100 105.130325814536 399 0 100 0 1 399 878 480 Mus musculus mobilized endogenous polytropic provirus clone 51 truncated gag-pol polyprotein (gag) and envelope protein (env) genes, complete cds blastn 41947 737 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Mus musculus mobilized endogenous polytropic provirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;