contig_metadata
39 rows where analysis = "blastn", bioproject = "PRJNA929522" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 905338 | 905338 | PRJNA929522_S_NODE_2801_length_399_cov_1.208589_g2731_i0 | PRJNA929522 | 2801 | 399 | 1.208589 | 4.82227011 | Burkholderiales bacterium | 1891238 | Bacteria | Bacteria | 63.9 | 1.77e-5 | NTclustered | gi|2108062438|gb|CP070753.1| | 1891238 | g2731 | i0 | 88.679 | 0.203007518796992 | 53 | 4 | 13 | 2 | 154 | 205 | 1140689 | 1140638 | MAG: Burkholderiales bacterium isolate bin300 chromosome | blastn | 81 | 63.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales bacterium | ||||
| 905347 | 905347 | PRJNA929522_S_NODE_4261_length_331_cov_4.104651_g4191_i0 | PRJNA929522 | 4261 | 331 | 4.104651 | 13.58639481 | Yersinia enterocolitica | 630 | Bacteria | Bacteria | 71.3 | 8.61e-8 | NTclustered | gi|2319067183|gb|CP107088.1| | 630 | g4191 | i0 | 97.619 | 4.99093655589124 | 42 | 0 | 12 | 1 | 1 | 41 | 608352 | 608311 | Yersinia enterocolitica strain Gp200 chromosome | blastn | 1652 | 71.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Yersinia | Yersinia enterocolitica | ||
| 905363 | 905363 | PRJNA929522_S_NODE_5921_length_290_cov_2.387097_g5851_i0 | PRJNA929522 | 5921 | 290 | 2.387097 | 6.9225813 | Yersinia enterocolitica | 630 | Bacteria | Bacteria | 97.1 | 1.22e-15 | NTclustered | gi|2319067183|gb|CP107088.1| | 630 | g5851 | i0 | 98.214 | 23.148275862069 | 56 | 0 | 19 | 1 | 1 | 55 | 608368 | 608313 | Yersinia enterocolitica strain Gp200 chromosome | blastn | 6713 | 97.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Yersinia | Yersinia enterocolitica | ||
| 905379 | 905379 | PRJNA929522_S_NODE_8841_length_249_cov_0.869318_g8771_i0 | PRJNA929522 | 8841 | 249 | 0.869318 | 2.16460182 | Methylobacterium indicum | 1775910 | Bacteria | Bacteria | 154 | 6.01e-33 | NTclustered | gi|2488004169|gb|CP121700.1| | 1775910 | g8771 | i0 | 83.951 | 2.56626506024096 | 162 | 25 | 65 | 1 | 84 | 244 | 4132105 | 4132266 | Methylobacterium indicum strain JDJ13 chromosome, complete genome | blastn | 639 | 154 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium indicum | ||
| 905380 | 905380 | PRJNA929522_S_NODE_9161_length_247_cov_0.885057_g9091_i0 | PRJNA929522 | 9161 | 247 | 0.885057 | 2.18609079 | Acidiferrobacter thiooxydans | 163359 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2131343496|gb|CP080624.1| | 163359 | g9091 | i0 | 100 | 0.11336032388664 | 28 | 0 | 11 | 0 | 199 | 226 | 1856100 | 1856127 | Acidiferrobacter thiooxydans strain ZJ chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Acidiferrobacterales | Acidiferrobacteraceae | Acidiferrobacter | Acidiferrobacter thiooxydans | ||
| 1253435 | 1253435 | PRJNA929522_S_NODE_2621_length_414_cov_1.058651_g2551_i0 | PRJNA929522 | 2621 | 414 | 1.058651 | 4.38281514 | root | 1 | Root_unresolved | Root_unresolved | 749 | 0 | NTclustered | gi|2293245086|gb|CP103401.1| | 549 | g2551 | i0 | 99.275 | 645.712560386473 | 414 | 3 | 100 | 0 | 1 | 414 | 82834 | 82421 | Pantoea agglomerans strain CHTF15 chromosome, complete genome | blastn | 267325 | 749 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Pantoea | Pantoea agglomerans | ||
| 1253440 | 1253440 | PRJNA929522_S_NODE_5361_length_302_cov_1.144105_g5291_i0 | PRJNA929522 | 5361 | 302 | 1.144105 | 3.4551971 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 217 | 9.42e-52 | NTclustered | gi|1496472130|dbj|AP018721.1| | 1914471 | g5291 | i0 | 84.722 | 69.4668874172185 | 216 | 33 | 72 | 0 | 1 | 216 | 1151273 | 1151058 | Sulfuritortus calidifontis J1A DNA, complete genome | blastn | 20979 | 219 | 0.990867579908676 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Thiobacillaceae | Sulfuritortus | Sulfuritortus calidifontis | ||
| 2180701 | 2180701 | PRJNA929522_S_NODE_10222_length_239_cov_2.391566_g10152_i0 | PRJNA929522 | 10222 | 239 | 2.391566 | 5.71584274 | Thiomicrorhabdus sediminis | 2580412 | Bacteria | Bacteria | 207 | 4.33e-49 | NTclustered | gi|1672761258|gb|CP040602.1| | 2580412 | g10152 | i0 | 85.5 | 152.794979079498 | 200 | 28 | 83 | 1 | 1 | 199 | 1894010 | 1893811 | Thiomicrorhabdus sediminis strain G1 chromosome, complete genome | blastn | 36518 | 207 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Thiotrichales | Piscirickettsiaceae | Thiomicrorhabdus | Thiomicrorhabdus sediminis | ||
| 2180744 | 2180744 | PRJNA929522_S_NODE_5782_length_293_cov_2.031818_g5712_i0 | PRJNA929522 | 5782 | 293 | 2.031818 | 5.95322674 | Nevskia ramosa | 64002 | Bacteria | Bacteria | 536 | 6.149999999999998e-148 | NTclustered | gi|1004607053|gb|KT865761.1| | 64002 | g5712 | i0 | 99.659 | 206.935153583618 | 293 | 1 | 100 | 0 | 1 | 293 | 1797 | 1505 | Nevskia ramosa strain DSM 11499 23S ribosomal RNA gene, partial sequence | blastn | 60632 | 536 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | Nevskia ramosa | ||
| 3456251 | 3456251 | PRJNA929522_S_NODE_7363_length_266_cov_1.196891_g7293_i0 | PRJNA929522 | 7363 | 266 | 1.196891 | 3.18373006 | Rubrivivax gelatinosus | 28068 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|381376528|dbj|AP012320.1| | 983917 | g7293 | i0 | 100 | 0.105263157894737 | 28 | 0 | 11 | 0 | 157 | 184 | 605034 | 605007 | Rubrivivax gelatinosus IL144 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Rubrivivax | Rubrivivax gelatinosus | ||
| 3456252 | 3456252 | PRJNA929522_S_NODE_7703_length_261_cov_1.228723_g7633_i0 | PRJNA929522 | 7703 | 261 | 1.228723 | 3.20696703 | Lysobacter capsici | 435897 | Bacteria | Bacteria | 58.4 | 5.12e-4 | NTclustered | gi|2223298584|gb|CP094357.1| | 435897 | g7633 | i0 | 94.595 | 4.8007662835249 | 37 | 2 | 14 | 0 | 197 | 233 | 180951 | 180987 | Lysobacter capsici strain VKM B-2533 chromosome, complete genome | blastn | 1253 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Lysobacter | Lysobacter capsici | ||
| 3805443 | 3805443 | PRJNA929522_S_NODE_4543_length_322_cov_1.289157_g4473_i0 | PRJNA929522 | 4543 | 322 | 1.289157 | 4.15108554 | Burkholderiaceae | 119060 | Bacteria | Bacteria | 540 | 5.29e-149 | NTclustered | gi|2459361258|gb|CP115952.1| | 859656 | g4473 | i0 | 96.894 | 185.503105590062 | 322 | 10 | 100 | 0 | 1 | 322 | 1464674 | 1464995 | Ralstonia solanacearum CFBP2957 chromosome, complete genome | blastn | 59732 | 545 | 0.990825688073395 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 4733794 | 4733794 | PRJNA929522_S_NODE_6444_length_281_cov_1.100962_g6374_i0 | PRJNA929522 | 6444 | 281 | 1.100962 | 3.09370322 | alpha proteobacterium HIMB5 | 859653 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|406651373|gb|CP003809.1| | 859653 | g6374 | i0 | 100 | 0.099644128113879 | 28 | 0 | 10 | 0 | 5 | 32 | 981073 | 981100 | Alpha proteobacterium HIMB5 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Candidatus Pelagibacterales | Candidatus Pelagibacteraceae | alpha proteobacterium HIMB5 | |||
| 6008569 | 6008569 | PRJNA929522_S_NODE_10565_length_226_cov_2.516340_g10495_i0 | PRJNA929522 | 10565 | 226 | 2.51634 | 5.6869284 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 351 | 1.77e-92 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g10495 | i0 | 94.69 | 3.88495575221239 | 226 | 12 | 100 | 0 | 1 | 226 | 4214987 | 4215212 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 878 | 351 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 6008618 | 6008618 | PRJNA929522_S_NODE_9805_length_243_cov_0.905882_g9735_i0 | PRJNA929522 | 9805 | 243 | 0.905882 | 2.20129326 | Sphingobium naphthae | 1886786 | Bacteria | Bacteria | 145 | 3.51e-30 | NTclustered | gi|2837338475|gb|CP171455.1| | 1886786 | g9735 | i0 | 80 | 82.0781893004115 | 205 | 33 | 83 | 8 | 43 | 243 | 410117 | 410317 | Sphingobium naphthae strain RL-ZY01 plasmid p02, complete sequence | blastn | 19945 | 145 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingobium | Sphingobium naphthae | ||
| 8558261 | 8558261 | PRJNA929522_S_NODE_4267_length_331_cov_1.941860_g4197_i0 | PRJNA929522 | 4267 | 331 | 1.94186 | 6.4275566 | Yersinia enterocolitica | 630 | Bacteria | Bacteria | 115 | 3.9200000000000006e-21 | NTclustered | gi|2319067183|gb|CP107088.1| | 630 | g4197 | i0 | 98.485 | 17.1389728096677 | 66 | 0 | 20 | 1 | 4 | 68 | 608378 | 608313 | Yersinia enterocolitica strain Gp200 chromosome | blastn | 5673 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Yersinia | Yersinia enterocolitica | ||
| 8558280 | 8558280 | PRJNA929522_S_NODE_7147_length_269_cov_1.540816_g7077_i0 | PRJNA929522 | 7147 | 269 | 1.540816 | 4.14479504 | Solimonas sp. K1W22B-7 | 2303331 | Bacteria | Bacteria | 457 | 4.4699999999999985e-124 | NTclustered | gi|1464353590|gb|CP031704.1| | 2303331 | g7077 | i0 | 97.398 | 340.226765799256 | 269 | 5 | 100 | 2 | 1 | 269 | 310104 | 309838 | Solimonas sp. K1W22B-7 chromosome, complete genome | blastn | 91521 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Solimonas | Solimonas sp. K1W22B-7 | ||
| 8906238 | 8906238 | PRJNA929522_S_NODE_6147_length_286_cov_1.469484_g6077_i0 | PRJNA929522 | 6147 | 286 | 1.469484 | 4.20272424 | Moraxellaceae | 468 | Bacteria | Bacteria | 503 | 6.069999999999998e-138 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g6077 | i0 | 98.592 | 364.699300699301 | 284 | 4 | 99 | 0 | 3 | 286 | 1496487 | 1496770 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 104304 | 503 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 11108953 | 11108953 | PRJNA929522_S_NODE_7249_length_268_cov_1.169231_g7179_i0 | PRJNA929522 | 7249 | 268 | 1.169231 | 3.13353908 | Candidatus Pelagibacter sp. FZCC0015 | 2268451 | Bacteria | Bacteria | 161 | 3.909999999999999e-35 | NTclustered | gi|1717438506|gb|CP031125.1| | 2268451 | g7179 | i0 | 80.365 | 2.83208955223881 | 219 | 38 | 81 | 5 | 52 | 268 | 631328 | 631113 | Candidatus Pelagibacter sp. FZCC0015 chromosome, complete genome | blastn | 759 | 161 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Candidatus Pelagibacterales | Candidatus Pelagibacteraceae | Candidatus Pelagibacter | Candidatus Pelagibacter sp. FZCC0015 | ||
| 11108956 | 11108956 | PRJNA929522_S_NODE_7609_length_262_cov_2.037037_g7539_i0 | PRJNA929522 | 7609 | 262 | 2.037037 | 5.33703694 | Methylobacterium sp. OTU13CASTA1 | 2953579 | Bacteria | Bacteria | 250 | 7.899999999999999e-62 | NTclustered | gi|2261078250|gb|CP099611.1| | 2953579 | g7539 | i0 | 88.406 | 4.11450381679389 | 207 | 24 | 79 | 0 | 31 | 237 | 4715195 | 4715401 | Methylobacterium sp. OTU13CASTA1 chromosome, complete genome | blastn | 1078 | 250 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. OTU13CASTA1 | ||
| 11457188 | 11457188 | PRJNA929522_S_NODE_8969_length_248_cov_0.880000_g8899_i0 | PRJNA929522 | 8969 | 248 | 0.88 | 2.1824 | Burkholderia | 32008 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1150393222|gb|CP017238.1| | 95486 | g8899 | i0 | 100 | 0.233870967741935 | 29 | 0 | 12 | 0 | 220 | 248 | 682272 | 682244 | Burkholderia cenocepacia strain CR318 chromosome 1, complete sequence | blastn | 58 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia cenocepacia | ||
| 12384423 | 12384423 | PRJNA929522_S_NODE_2650_length_411_cov_1.044379_g2580_i0 | PRJNA929522 | 2650 | 411 | 1.044379 | 4.29239769 | Pseudomonas batumici | 226910 | Bacteria | Bacteria | 71.3 | 1.09e-7 | NTclustered | gi|2674937323|gb|CP144470.1| | 226910 | g2580 | i0 | 95.455 | 0.10705596107056 | 44 | 2 | 11 | 0 | 99 | 142 | 5611816 | 5611859 | Pseudomonas batumici strain Koz11 chromosome, complete genome | blastn | 44 | 71.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas batumici | ||
| 12384436 | 12384436 | PRJNA929522_S_NODE_3730_length_349_cov_1.601449_g3660_i0 | PRJNA929522 | 3730 | 349 | 1.601449 | 5.58905701 | Candidatus Nasuia deltocephalincola | 1160784 | Bacteria | Bacteria | 108 | 6.93e-19 | NTclustered | gi|2293493127|gb|CP094185.1| | 1160784 | g3660 | i0 | 79.73 | 3.42406876790831 | 148 | 30 | 42 | 0 | 16 | 163 | 4046 | 4193 | Candidatus Nasuia deltocephalinicola strain KIPI chromosome, complete genome | blastn | 1195 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Candidatus Nasuia | Candidatus Nasuia deltocephalincola | ||||
| 12384455 | 12384455 | PRJNA929522_S_NODE_6790_length_275_cov_1.143564_g6720_i0 | PRJNA929522 | 6790 | 275 | 1.143564 | 3.144801 | Gilliamella sp. ESL0441 | 2704654 | Bacteria | Bacteria | 58.4 | 5.43e-4 | NTclustered | gi|2077481543|gb|CP048264.1| | 2704654 | g6720 | i0 | 100 | 0.112727272727273 | 31 | 0 | 11 | 0 | 166 | 196 | 1323979 | 1323949 | Gilliamella sp. ESL0441 chromosome, complete genome | blastn | 31 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Orbales | Orbaceae | Gilliamella | Gilliamella sp. ESL0441 | ||
| 12384466 | 12384466 | PRJNA929522_S_NODE_8430_length_251_cov_1.342697_g8360_i0 | PRJNA929522 | 8430 | 251 | 1.342697 | 3.37016947 | Buchnera aphidicola | 9 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1486573969|emb|LR025085.1| | 1921549 | g8360 | i0 | 94.595 | 0.294820717131474 | 37 | 1 | 15 | 1 | 213 | 249 | 57071 | 57036 | Buchnera aphidicola (Cinara strobi) strain BuCistrobi genome assembly, chromosome: 1 | blastn | 74 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Buchnera | Buchnera aphidicola | ||
| 12732848 | 12732848 | PRJNA929522_S_NODE_2830_length_397_cov_0.969136_g2760_i0 | PRJNA929522 | 2830 | 397 | 0.969136 | 3.84746992 | Methylobacterium | 407 | Bacteria | Bacteria | 529 | 1.4399999999999994e-145 | NTclustered | gi|2261082790|gb|CP099612.1| | 409 | g2760 | i0 | 90.704 | 140.130982367758 | 398 | 35 | 100 | 2 | 1 | 397 | 11401 | 11005 | Methylobacterium sp. strain bacterial plasmid unnamed4, complete sequence | blastn | 55632 | 534 | 0.99063670411985 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. | ||
| 13658988 | 13658988 | PRJNA929522_S_NODE_4491_length_323_cov_2.744000_g4421_i0 | PRJNA929522 | 4491 | 323 | 2.744 | 8.86312 | Alteromonas sp. H39 | 3389876 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|2905521388|gb|CP180210.1| | 3389876 | g4421 | i0 | 100 | 0.086687306501548 | 28 | 0 | 9 | 0 | 217 | 244 | 1752396 | 1752423 | Alteromonas sp. H39 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Alteromonadaceae | Alteromonas | Alteromonas sp. H39 | ||
| 13658998 | 13658998 | PRJNA929522_S_NODE_611_length_797_cov_6.303867_g557_i0 | PRJNA929522 | 611 | 797 | 6.303867 | 50.24181999 | Lysobacter sp. 5GHs7-4 | 2904253 | Bacteria | Bacteria | 87.9 | 2.19e-12 | NTclustered | gi|2170222502|gb|CP089924.1| | 2904253 | g557 | i0 | 83.168 | 2.099121706399 | 101 | 11 | 12 | 3 | 421 | 515 | 3864715 | 3864615 | Lysobacter sp. 5GHs7-4 chromosome, complete genome | blastn | 1673 | 87.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Lysobacter | Lysobacter sp. 5GHs7-4 | ||
| 16208252 | 16208252 | PRJNA929522_S_NODE_10733_length_207_cov_27.858209_g10663_i0 | PRJNA929522 | 10733 | 207 | 27.858209 | 57.66649263 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 372 | 1.2199999999999997e-98 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g10663 | i0 | 99.034 | 14.5845410628019 | 207 | 2 | 100 | 0 | 1 | 207 | 5038332 | 5038538 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 3019 | 372 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 16208328 | 16208328 | PRJNA929522_S_NODE_9973_length_242_cov_0.911243_g9903_i0 | PRJNA929522 | 9973 | 242 | 0.911243 | 2.20520806 | Bradyrhizobium sp. PSBB068 | 2715960 | Bacteria | Bacteria | 431 | 2.4e-116 | NTclustered | gi|1979381481|gb|CP069300.1| | 2715960 | g9903 | i0 | 98.76 | 5.1198347107438 | 242 | 3 | 100 | 0 | 1 | 242 | 4964115 | 4963874 | Bradyrhizobium sp. PSBB068 chromosome, complete genome | blastn | 1239 | 431 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. PSBB068 | ||
| 16555953 | 16555953 | PRJNA929522_S_NODE_7393_length_265_cov_1.937500_g7323_i0 | PRJNA929522 | 7393 | 265 | 1.9375 | 5.134375 | Limnohabitans | 665874 | Bacteria | Bacteria | 412 | 9.64e-111 | NTclustered | gi|2687945360|dbj|AP029223.1| | 509112 | g7323 | i0 | 94.717 | 236.618867924528 | 265 | 14 | 100 | 0 | 1 | 265 | 3060206 | 3059942 | Beta proteobacterium INBF004 DNA, complete genome | blastn | 62704 | 412 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | beta proteobacterium INBF004 | |||||
| 18756872 | 18756872 | PRJNA929522_S_NODE_315_length_1042_cov_14.522188_g278_i0 | PRJNA929522 | 315 | 1042 | 14.522188 | 151.32119896 | Sinorhizobium fredii | 380 | Bacteria | Bacteria | 54.7 | 0.029 | NTclustered | gi|227339586|gb|CP001389.1| | 394 | g278 | i0 | 100 | 0.02783109404990399 | 29 | 0 | 3 | 0 | 772 | 800 | 518123 | 518151 | Sinorhizobium fredii NGR234, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Sinorhizobium | Sinorhizobium fredii | ||
| 20031995 | 20031995 | PRJNA929522_S_NODE_4556_length_322_cov_0.734940_g4486_i0 | PRJNA929522 | 4556 | 322 | 0.73494 | 2.3665068 | Escherichia coli | 562 | Bacteria | Bacteria | 73.1 | 2.32e-8 | NTclustered | gi|2463378371|dbj|AP027461.1| | 511145 | g4486 | i0 | 91.071 | 8.76086956521739 | 56 | 2 | 17 | 3 | 1 | 54 | 1628353 | 1628407 | Escherichia coli str. K-12 substr. MG1655 D41c DNA, complete genome | blastn | 2821 | 73.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20379785 | 20379785 | PRJNA929522_S_NODE_4776_length_316_cov_0.987654_g4706_i0 | PRJNA929522 | 4776 | 316 | 0.987654 | 3.12098664 | Roseateles | 93681 | Bacteria | Bacteria | 579 | 1.0999999999999999e-160 | NTclustered | gi|2411506169|gb|OP986721.1| | 65048 | g4706 | i0 | 99.684 | 119.566455696203 | 316 | 1 | 100 | 0 | 1 | 316 | 12 | 327 | Mitsuaria chitosanitabida strain AFS078268 16S ribosomal RNA gene, partial sequence | blastn | 37783 | 579 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles chitosanitabidus | ||
| 21307451 | 21307451 | PRJNA929522_S_NODE_8257_length_253_cov_2.161111_g8187_i0 | PRJNA929522 | 8257 | 253 | 2.161111 | 5.46761083 | Usitatibacter rugosus | 2732067 | Bacteria | Bacteria | 58.4 | 4.93e-4 | NTclustered | gi|1839971287|gb|CP053069.1| | 2732067 | g8187 | i0 | 97.059 | 0.260869565217391 | 34 | 1 | 13 | 0 | 145 | 178 | 2157958 | 2157991 | Usitatibacter rugosus strain 0125_3 chromosome, complete genome | blastn | 66 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Usitatibacteraceae | Usitatibacter | Usitatibacter rugosus | ||
| 22582421 | 22582421 | PRJNA929522_S_NODE_10438_length_231_cov_2.436709_g10368_i0 | PRJNA929522 | 10438 | 231 | 2.436709 | 5.62879779 | Coxiellaceae bacterium | 2026727 | Bacteria | Bacteria | 111 | 3.36e-20 | NTclustered | gi|1869338093|gb|CP058706.1| | 2026727 | g10368 | i0 | 75.847 | 84.051948051948 | 236 | 48 | 99 | 6 | 2 | 231 | 987836 | 987604 | Coxiellaceae bacterium isolate SSA3 chromosome | blastn | 19416 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Legionellales | Coxiellaceae | Coxiellaceae bacterium | |||
| 22931224 | 22931224 | PRJNA929522_S_NODE_4938_length_312_cov_1.041841_g4868_i0 | PRJNA929522 | 4938 | 312 | 1.041841 | 3.25054392 | Stutzerimonas | 2901164 | Bacteria | Bacteria | 58.4 | 6.27e-4 | NTclustered | gi|2844117519|gb|CP172234.1| | 74829 | g4868 | i0 | 87.037 | 1.12820512820513 | 54 | 4 | 17 | 2 | 258 | 311 | 71437 | 71487 | Stutzerimonas balearica strain Y11 chromosome, complete genome | blastn | 352 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Stutzerimonas | Stutzerimonas balearica | ||
| 23857720 | 23857720 | PRJNA929522_S_NODE_6919_length_272_cov_6.115578_g6849_i0 | PRJNA929522 | 6919 | 272 | 6.115578 | 16.63437216 | Methylobacterium durans | 2202825 | Bacteria | Bacteria | 165 | 3.07e-36 | NTclustered | gi|1393177325|gb|CP029550.1| | 2202825 | g6849 | i0 | 79.615 | 31.2169117647059 | 260 | 29 | 96 | 17 | 3 | 262 | 1389910 | 1389675 | Methylobacterium durans strain 17SD2-17 chromosome, complete genome | blastn | 8491 | 165 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium durans | ||
| 24204998 | 24204998 | PRJNA929522_S_NODE_10459_length_230_cov_2.509554_g10389_i0 | PRJNA929522 | 10459 | 230 | 2.509554 | 5.7719742 | Pseudomonadota | 1224 | Bacteria | Bacteria | 425 | 1.05e-114 | NTclustered | gi|1424054049|gb|MH612951.1| | 391 | g10389 | i0 | 100 | 101 | 230 | 0 | 100 | 0 | 1 | 230 | 488 | 717 | Rhizobium sp. strain 4-2-R5 16S ribosomal RNA gene, partial sequence | blastn | 23230 | 425 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;