RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA929522" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929522 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9833250 9833250 PRJNA929522_S_NODE_9208_length_246_cov_1.780347_g9138_i0 PRJNA929522 9208 246 1.780347 4.37965362 Umbelopsis isabellina 91625 Fungi Fungi 165 2.74e-36   NTclustered gi|1068083945|gb|KX424916.1| 91625 g9138 i0 84.211 30.349593495935 171 25 69 2 10 179 458 289 Umbelopsis isabellina strain M6-22 NAD-dependent malate dehydrogenase mRNA, complete cds blastn 7466 165 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis isabellina
12384446 12384446 PRJNA929522_S_NODE_5410_length_301_cov_1.140351_g5340_i0 PRJNA929522 5410 301 1.140351 3.43245651 Absidia saloaensis 2698938 Fungi Fungi 545 1.0499999999999999e-150   NTclustered gi|1798056214|gb|MN953783.1| 2698938 g5340 i0 99.336 98.3853820598007 301 2 100 0 1 301 363 663 Absidia saloaensis strain URM:8209 large subunit ribosomal RNA gene, partial sequence blastn 29614 545 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia saloaensis
13659002 13659002 PRJNA929522_S_NODE_6871_length_273_cov_2.310000_g6801_i0 PRJNA929522 6871 273 2.31 6.3063 Radiomyces spectabilis 64574 Fungi Fungi 141 5.2e-29   NTclustered gi|2323750843|ref|XM_051569791.1| 64574 g6801 i0 84.247 1.78388278388278 146 21 53 2 128 272 282 426 Radiomyces spectabilis succinyl-CoA ligase subunit alpha (BYT42DRAFT_583598), mRNA blastn 487 141 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
18756892 18756892 PRJNA929522_S_NODE_6235_length_284_cov_1.857820_g6165_i0 PRJNA929522 6235 284 1.85782 5.2762088 Lichtheimia ornata 688661 Fungi Fungi 283 8.539999999999999e-72   NTclustered gi|2553594699|ref|XM_058489316.1| 688661 g6165 i0 89.333 75.0035211267606 225 24 79 0 10 234 240 16 Lichtheimia ornata heat shock protein HSS1 (O0I10_009322), partial mRNA blastn 21301 283 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
21307434 21307434 PRJNA929522_S_NODE_5457_length_300_cov_1.281938_g5387_i0 PRJNA929522 5457 300 1.281938 3.845814 Phycomyces blakesleeanus 4837 Fungi Fungi 215 3.36e-51   NTclustered gi|1069941228|ref|XM_018428823.1| 763407 g5387 i0 80.851 36.1633333333333 282 46 93 8 7 284 312 35 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 10849 215 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
23857732 23857732 PRJNA929522_S_NODE_9299_length_246_cov_0.890173_g9229_i0 PRJNA929522 9299 246 0.890173 2.18982558 Absidia sp. (in: mucoromycotan fungi) 1982014 Fungi Fungi 211 3.46e-50   NTclustered gi|1838434292|gb|MT436029.1| 1982014 g9229 i0 96.825 44.8089430894309 126 4 51 0 121 246 5727 5602 Absidia sp. (in: fungi) strain UoMAU379 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11023 211 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia sp. (in: mucoromycotan fungi)
25131494 25131494 PRJNA929522_S_NODE_5500_length_299_cov_1.022124_g5430_i0 PRJNA929522 5500 299 1.022124 3.05615076 Mucor mucedo 29922 Fungi Fungi 213 1.21e-50   NTclustered gi|2324050007|ref|XM_051601342.1| 29922 g5430 i0 80.714 46.2976588628763 280 48 93 6 12 288 110 386 Mucor mucedo S-adenosylmethionine synthase (EV154DRAFT_506880), mRNA blastn 13843 213 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;