RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA929522" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929522 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18756874 18756874 PRJNA929522_S_NODE_3695_length_351_cov_1.115108_g3625_i0 PRJNA929522 3695 351 1.115108 3.91402908 Patiria miniata 46514 Echinodermata other_Eukaryota 52.8 0.033   NTclustered gi|1944817505|ref|XM_038191576.1| 46514 g3625 i0 100 0.15954415954416 28 0 8 0 237 264 557 530 PREDICTED: Patiria miniata protein lin-9 homolog (LOC119721488), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
18756904 18756904 PRJNA929522_S_NODE_7615_length_262_cov_1.867725_g7545_i0 PRJNA929522 7615 262 1.867725 4.8934395 Anneissia japonica 1529436 Echinodermata other_Eukaryota 145 3.83e-30   NTclustered gi|1826668121|ref|XM_033265777.1| 1529436 g7545 i0 78.541 7.29770992366412 233 40 88 6 18 248 886 1110 PREDICTED: Anneissia japonica serine/threonine-protein kinase 3-like (LOC117120720), mRNA blastn 1912 145 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
21307445 21307445 PRJNA929522_S_NODE_6937_length_272_cov_1.547739_g6867_i0 PRJNA929522 6937 272 1.547739 4.20985008 Diadema antillarum 105358 Echinodermata other_Eukaryota 180 1.1e-40   NTclustered gi|2919420762|ref|XM_071635214.1| 105358 g6867 i0 80.162 48.0404411764706 247 43 90 6 29 272 1102 1345 PREDICTED: Diadema antillarum alpha-enolase-like (LOC139724015), mRNA blastn 13067 180 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;