RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA929522" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929522 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11108921 11108921 PRJNA929522_S_NODE_2049_length_464_cov_2.140665_g1979_i0 PRJNA929522 2049 464 2.140665 9.9326856 Polychytrium aggregatum 110093 Fungi Fungi 412 1.7899999999999996e-110   NTclustered gi|2432131711|ref|XM_053109357.1| 110093 g1979 i0 90.645 65.1487068965517 310 29 67 0 153 462 578 269 Polychytrium aggregatum calmodulin (BJ171DRAFT_488251), mRNA blastn 30229 412 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20031987 20031987 PRJNA929522_S_NODE_3516_length_359_cov_1.031469_g3446_i0 PRJNA929522 3516 359 1.031469 3.70297371 Polychytrium aggregatum 110093 Fungi Fungi 291 6.62e-74   NTclustered gi|2432134333|ref|XM_053109764.1| 110093 g3446 i0 81.638 93.3871866295265 354 61 98 4 3 354 286 637 Polychytrium aggregatum 60S ribosomal protein I1-a (BJ171DRAFT_491703), mRNA blastn 33526 291 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23857709 23857709 PRJNA929522_S_NODE_5059_length_309_cov_1.305085_g4989_i0 PRJNA929522 5059 309 1.305085 4.03271265 Fimicolochytrium jonesii 1396493 Fungi Fungi 263 1.22e-65   NTclustered gi|2432062018|ref|XM_053066242.1| 1396493 g4989 i0 82.935 57.9838187702265 293 48 94 2 7 298 782 491 Fimicolochytrium jonesii succinyl-CoA synthetase-like protein (EV422DRAFT_317177), mRNA blastn 17917 263 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;