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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA929522" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA929522 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2180760 2180760 PRJNA929522_S_NODE_8882_length_248_cov_1.760000_g8812_i0 PRJNA929522 8882 248 1.76 4.3648 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|916498379|ref|XM_013494555.1| 44415 g8812 i0 100 0.112903225806452 28 0 11 0 221 248 1163 1190 Eimeria mitis NAD-dependent DNA ligase OB-fold domain containing protein, putative (EMH_0009570), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
4733768 4733768 PRJNA929522_S_NODE_1824_length_490_cov_1.911271_g1754_i0 PRJNA929522 1824 490 1.911271 9.3652279 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 58.4 0.001   NTclustered gi|1931713813|ref|XM_037634927.1| 54757 g1754 i0 100 0.253061224489796 31 0 6 0 20 50 1112 1082 Plasmodium vinckei vinckei Plasmodium exported protein, unknown function (PVVCY_0301705), partial mRNA blastn 124 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
9833227 9833227 PRJNA929522_S_NODE_4248_length_332_cov_1.189189_g4178_i0 PRJNA929522 4248 332 1.189189 3.94810748 Plasmodium cynomolgi 5827 SAR_Eukaryotes SAR_Eukaryotes 187 8.219999999999999e-43   NTclustered gi|457872807|ref|XM_004223275.1| 1120755 g4178 i0 80.753 58.5331325301205 239 46 72 0 3 241 133 371 Plasmodium cynomolgi strain B histone H3 (PCYB_113960) mRNA, complete cds blastn 19433 187 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
11108943 11108943 PRJNA929522_S_NODE_49_length_1930_cov_7.264405_g38_i0 PRJNA929522 49 1930 7.264405 140.2030165 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.015   NTclustered gi|916420131|ref|XM_013375843.1| 5802 g38 i0 100 0.0155440414507772 30 0 2 0 196 225 2316 2287 Eimeria tenella protein kinase (incomplete catalytic triad), putative (ETH_00019920), partial mRNA blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
17830934 17830934 PRJNA929522_S_NODE_3434_length_362_cov_1.636678_g3364_i0 PRJNA929522 3434 362 1.636678 5.92477436 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 209 1.92e-49   NTclustered gi|1084954590|ref|XM_018783222.1| 647221 g3364 i0 78.035 8.08011049723757 346 66 94 9 22 362 759 1099 Plasmodium gaboni heat shock protein 70 partial mRNA blastn 2925 209 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
19104874 19104874 PRJNA929522_S_NODE_2315_length_437_cov_6.771978_g2245_i0 PRJNA929522 2315 437 6.771978 29.59354386 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 248 5.02e-61   NTclustered gi|160318|gb|M86865.1|PFAH2AA 5833 g2245 i0 83.456 8.91533180778032 272 40 62 5 5 274 353 85 Plasmodium falciparum histone 2A (H2A) mRNA, complete cds blastn 3896 248 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
22582428 22582428 PRJNA929522_S_NODE_1558_length_527_cov_1.372247_g1488_i0 PRJNA929522 1558 527 1.372247 7.23174169 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 412 2.0599999999999994e-110   NTclustered gi|82704988|ref|XM_721689.1| 5861 g1488 i0 81.071 25.2637571157495 523 93 99 5 1 520 1084 565 Plasmodium yoelii 26S proteasome subunit 4 protein (PY17X_1209800), partial mRNA blastn 13314 412 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
25479988 25479988 PRJNA929522_S_NODE_8140_length_255_cov_1.230769_g8070_i0 PRJNA929522 8140 255 1.230769 3.13846095 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 226 1.2899999999999997e-54   NTclustered gi|1084892469|ref|XM_018787044.1| 647221 g8070 i0 87.692 41.2156862745098 195 23 76 1 3 197 655 848 Plasmodium gaboni putative 26S protease regulatory subunit 8 partial mRNA blastn 10510 228 0.991228070175439 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;